RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 CCDC127Q96BQ5 260 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF578Q96N58 590 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-218ENST00000555628 LGMNQ99538 433 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 MED10Q9BTT4 135 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
PRKCH-218ENST00000555628 ERVMER34-1Q9H9K5 563 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 PANK4Q9NVE7 773 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
PRKCH-218ENST00000555628 DOCK9Q9BZ29 2069 aa9.5□□□□□ -0.89
PRKCH-218ENST00000555628 TEP1Q99973 2627 aaKnown RBP9.49□□□□□ -0.89
PRKCH-218ENST00000555628 TRIM38O00635 465 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 LATO43561 262 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 C4BPAP04003 597 aaKnown RBP9.49□□□□□ -0.89
PRKCH-218ENST00000555628 ITGAVP06756 1048 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 KRT10P13645 584 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 IDEP14735 1019 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 TNNI1P19237 187 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 CASP4P49662 377 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 NDST1P52848 882 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 C21orf59P57076 290 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 INCA1Q0VD86 236 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 BNIP3Q12983 259 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 E2F5Q15329 346 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 TLR1Q15399 786 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 ARHGAP40Q5TG30 622 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 NCEH1Q6PIU2 408 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 C12orf56Q8IXR9 622 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 RASSF8Q8NHQ8 419 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 WFIKKN2Q8TEU8 576 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 GDF3Q9NR23 364 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
PRKCH-218ENST00000555628 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-218ENST00000555628 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 LRRIQ3A6PVS8 624 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 K7ENP7 123 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 SLC28A2O43868 658 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 MT-CO3P00414 261 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 THBS1P07996 1170 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 DLDP09622 509 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 GIMD1P0DJR0 217 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 ABCB4P21439 1286 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 CD38P28907 300 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 CCR5P51681 352 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 SGSHP51688 502 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 ERVPABLB-1P60509 514 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 COG7P83436 770 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 FNDC3BQ53EP0 1204 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 RRAGBQ5VZM2 374 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF776Q68DI1 518 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 INO80CQ6PI98 192 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 ADAT2Q7Z6V5 191 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 DENND1CQ8IV53 801 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 DHX40Q8IX18 779 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF837Q96EG3 531 aaPredicted RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 NAF1Q96HR8 494 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 DCLK3Q9C098 648 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 NAGPAQ9UK23 515 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
PRKCH-218ENST00000555628 U3KQA8 63 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
PRKCH-218ENST00000555628 TLR4O00206 839 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 ATP9BO43861 1147 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
PRKCH-218ENST00000555628 DNTTP04053 509 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 MPOP05164 745 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 GJB2P29033 226 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 LSSP48449 732 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 CYP2J2P51589 502 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 EFEMP1Q12805 493 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 TRPC3Q13507 836 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 TTC31Q49AM3 519 aaPredicted RBP9.47□□□□□ -0.89
PRKCH-218ENST00000555628 ZNF667Q5HYK9 610 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 RAB41Q5JT25 222 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 COLEC12Q5KU26 742 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 C1orf220Q5T0J3 134 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 KDM7AQ6ZMT4 941 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 CHST9Q7L1S5 443 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 SLC25A45Q8N413 288 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 AADATQ8N5Z0 425 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 XXYLT1Q8NBI6 393 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 OR2T34Q8NGX1 318 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 PARD3BQ8TEW8 1205 aa9.47□□□□□ -0.89
PRKCH-218ENST00000555628 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 365.5 ms