RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CXCR3P49682 368 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 ATXN1P54253 815 aaKnown RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 ARHGAP8P85298 464 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 FANCCQ00597 558 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF177Q13360 481 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 TTC39BQ5VTQ0 682 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 SFMBT2Q5VUG0 894 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 LYSMD4Q5XG99 296 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 RNF43Q68DV7 783 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 LRRC31Q6UY01 552 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 SLC36A4Q6YBV0 504 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 KIAA0907Q7Z7F0 614 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 C14orf80Q86SX3 495 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 FAM131BQ86XD5 332 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 APCDD1Q8J025 514 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 RXFP2Q8WXD0 754 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 IGSF8Q969P0 613 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 RMDN1Q96DB5 314 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 PRMT1Q99873 361 aaKnown RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 MKRN2Q9H000 416 aaKnown RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 CD93Q9NPY3 652 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 VPS45Q9NRW7 570 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 SUN2Q9UH99 717 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 TMEM59LQ9UK28 342 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 INTS6Q9UL03 887 aaKnown RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 SNX10Q9Y5X0 201 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 HS3ST4Q9Y661 456 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 DMXL1Q9Y485 3027 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 CABIN1Q9Y6J0 2220 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 TMEM131Q92545 1883 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 CHD8Q9HCK8 2581 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 KMT2BQ9UMN6 2715 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 IGHV1OR15-9A0A0B4J2B8 117 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 A0A1W2PQC6 194 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TMCO5BA8MYB1 307 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 FOXD2O60548 495 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 SRGAP2O75044 1071 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 KRT3P12035 628 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 UNGP13051 313 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 SDHBP21912 280 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 NNMTP40261 264 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PTGER3P43115 390 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 CTSOP43234 321 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 IRAK1P51617 712 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 OXCT1P55809 520 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 UBASH3AP57075 661 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 ECT2LQ008S8 904 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 ENPP2Q13822 863 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PTPRNQ16849 979 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 C15orf59Q2T9L4 293 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PLEKHG6Q3KR16 790 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TCEAL6Q6IPX3 200 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TRNP1Q6NT89 227 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 DNAJC24Q6P3W2 148 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 FAM124AQ86V42 546 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PHF13Q86YI8 300 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 RGL4Q8IZJ4 473 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 JOSD2Q8TAC2 188 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TCEAL3Q969E4 200 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TTC17Q96AE7 1141 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 MUC3BQ9H195 1237 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 MTG2Q9H4K7 406 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 CD248Q9HCU0 757 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 TMPRSS4Q9NRS4 437 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 ARHGEF38Q9NXL2 777 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 MYO6Q9UM54 1294 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 ERVW-1Q9UQF0 538 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
SHMT2-213ENST00000554600 SHROOM3Q8TF72 1996 aa10.99□□□□□ -0.65
SHMT2-213ENST00000554600 PLXNA2O75051 1894 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ANKRD36A6QL64 1941 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 PCNX2A6NKB5 2137 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 MEI4A8MW99 385 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TTC34A8MYJ7 566 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 GDF9O60383 454 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 CLDN11O75508 207 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 RHOCP08134 193 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 GPD1P21695 349 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 KCNA4P22459 653 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ITPKAP23677 461 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 MZF1P28698 734 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 CD6P30203 668 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 STK19P49842 368 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TPMTP51580 245 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 COPAP53621 1224 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 CDH4P55283 916 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 KLHL30Q0D2K2 578 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 CAMK2GQ13555 558 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 SLC12A1Q13621 1099 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 NR1I3Q14994 352 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ARL13BQ3SXY8 428 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ACCSLQ4AC99 568 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms