RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 NCAM1P13591 858 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 CNTFP26441 200 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 ARRB2P32121 409 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 PEX19P40855 299 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 TPI1P60174 286 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 MFSD10Q14728 455 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 TIFABQ6ZNK6 161 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 ARCQ7LC44 396 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 STRA8Q7Z7C7 330 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 PLD6Q8N2A8 252 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 DCLK2Q8N568 766 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 BRI3BPQ8WY22 251 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 WNT8BQ93098 351 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 PANX3Q96QZ0 392 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 SNX15Q9NRS6 342 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 GDAP2Q9NXN4 497 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 DICER1Q9UPY3 1922 aaKnown RBP16.08■□□□□ 0.16
ARHGEF40-203ENST00000554514 NRCAMQ92823 1304 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 LOC100653049A0A140TA62 436 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 KRT34O76011 436 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 USP1O94782 785 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 SERPINA6P08185 405 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 MLNP12872 115 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 EPHB1P54762 984 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 IRF9Q00978 393 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 HSP90AA5PQ58FG0 334 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 UBXN11Q5T124 520 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 MFSD3Q96ES6 412 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 NPY6RQ99463 290 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 MAN1C1Q9NR34 630 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 DDIT4Q9NX09 232 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 DDX43Q9NXZ2 648 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 SBF1O95248 1867 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 I6L893 689 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZBTB24O43167 697 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 XPOTO43592 962 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZMPSTE24O75844 475 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 TOMM70O94826 608 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 PTPN3P26045 913 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 PNPLA4P41247 253 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 TUBP50607 506 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 USP4Q13107 963 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 RALGPS1Q5JS13 557 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 HIPK4Q8NE63 616 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 SH3TC2Q8TF17 1288 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 CCDC124Q96CT7 223 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 CELF6Q96J87 481 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 HNRNPABQ99729 332 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 CPSF2Q9P2I0 782 aaKnown RBP16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 DCDC2Q9UHG0 476 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 SLC7A8Q9UHI5 535 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 NUP205Q92621 2012 aa16.07■□□□□ 0.16
ARHGEF40-203ENST00000554514 AP1G2O75843 785 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 SORBS2O94875 1100 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 RALBP11234 206 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 GLUD2P49448 558 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 C6orf163Q5TEZ5 329 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 MAVSQ7Z434 540 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 NPWQ8N729 165 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 SMG8Q8ND04 991 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 PROCP04070 461 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 SERPINE1P05121 402 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 PRKCGP05129 697 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 GP5P40197 560 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 RPL34P49207 117 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 CBLBQ13191 982 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 LDLRAD1Q5T700 205 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 TLK2Q86UE8 772 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 PPFIBP2Q8ND30 876 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 YIPF3Q9GZM5 350 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 MMADHCQ9H3L0 296 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 COPG2Q9UBF2 871 aa16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 G3BP2Q9UN86 482 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-203ENST00000554514 PDE5AO76074 875 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ACADSP16219 412 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ADRA1BP35368 520 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 SCNN1AP37088 669 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 DPYSQ14117 519 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 PAN2Q504Q3 1202 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 TMEM154Q6P9G4 183 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms