RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ATG13O75143 517 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 POU2F2P09086 479 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 GDF5P43026 501 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 RAB27AP51159 221 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 PTH1RQ03431 593 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 KARSQ15046 597 aaKnown RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ALX1Q15699 326 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 PABPC1LQ4VXU2 614 aaKnown RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 FAM160B1Q5W0V3 765 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 TANGO2Q6ICL3 276 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 CCNI2Q6ZMN8 369 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 USP51Q70EK9 711 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 RTL10Q7L3V2 364 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 MTMR8Q96EF0 704 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 MCRS1Q96EZ8 462 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 SCLT1Q96NL6 688 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 SDF4Q9BRK5 362 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 PLA2G2FQ9BZM2 168 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 LRRCC1Q9C099 1032 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 RNF41Q9H4P4 317 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF334Q9HCZ1 680 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-223ENST00000553686 PARPBPQ9NWS1 579 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 DKK4Q9UBT3 224 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 TNNQ9UQP3 1299 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 COL1A2P08123 1366 aa6.51□□□□□ -1.37
ATXN3-223ENST00000553686 PLXNA4Q9HCM2 1894 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 A0A087WV48 116 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 PRAMEF4O60810 478 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 DDHD2O94830 711 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 DARSP14868 501 aaKnown RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 PSMC3P17980 439 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 GDI1P31150 447 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 ACVRL1P37023 503 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 ABCG1P45844 678 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 OR1G1P47890 313 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 ACTR2P61160 394 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 CDK17Q00537 523 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 USP41Q3LFD5 358 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 TWF2Q6IBS0 349 aaKnown RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 CAMKK1Q8N5S9 505 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 CSGALNACT1Q8TDX6 532 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 DEPDC1BQ8WUY9 529 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 SEC62Q99442 399 aaKnown RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 MNTQ99583 582 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 INO80BQ9C086 356 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-223ENST00000553686 CEP72Q9P209 647 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 AKAP13Q12802 2813 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 LAMA5O15230 3695 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 LCTP09848 1927 aa6.5□□□□□ -1.37
ATXN3-223ENST00000553686 KALRNO60229 2985 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 ZNF197O14709 1029 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 CCL16O15467 120 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 GPR39O43194 453 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 ANP32CO43423 234 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 C22orf31O95567 290 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 CTSSP25774 331 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 GZMKP49863 264 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 ATXN3P54252 364 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 WNT3AP56704 352 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 IRX4P78413 519 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 CFHR1Q03591 330 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 RNF168Q8IYW5 571 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 HDDC3Q8N4P3 179 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 UBN1Q9NPG3 1134 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 RBM12Q9NTZ6 932 aaKnown RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 FBXW11Q9UKB1 542 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 PRG3Q9Y2Y8 225 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-223ENST00000553686 UBIAD1Q9Y5Z9 338 aa6.49□□□□□ -1.37
ATXN3-223ENST00000553686 PIEZO2Q9H5I5 2752 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms