RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 SRFBP1Q8NEF9 429 aaKnown RBP4.74□□□□□ -1.65
FCF1-204ENST00000553673 STT3BQ8TCJ2 826 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 OTUD7AQ8TE49 926 aaPredicted RBP4.74□□□□□ -1.65
FCF1-204ENST00000553673 DENND1AQ8TEH3 1009 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 HMGB4Q8WW32 186 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 NPIPB3Q92617 1050 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 RUBCNQ92622 972 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 SENP7Q9BQF6 1050 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 NUAK2Q9H093 628 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 BRD8Q9H0E9 1235 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 PABPC3Q9H361 631 aaKnown RBP4.74□□□□□ -1.65
FCF1-204ENST00000553673 ARL8BQ9NVJ2 186 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 C19orf53Q9UNZ5 99 aaPredicted RBP4.74□□□□□ -1.65
FCF1-204ENST00000553673 CNTN6Q9UQ52 1028 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 HEMK1Q9Y5R4 338 aaPredicted RBP4.74□□□□□ -1.65
FCF1-204ENST00000553673 MROH1Q8NDA8 1641 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 RAB3GAP2Q9H2M9 1393 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 A2ML1A8K2U0 1454 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 NLRP1Q9C000 1473 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 VWDEQ8N2E2 1590 aa4.74□□□□□ -1.65
FCF1-204ENST00000553673 RIMS1Q86UR5 1692 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 ADGBQ8N7X0 1667 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 RNF17Q9BXT8 1623 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 EIF2AK4Q9P2K8 1649 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 LOC105369274A0A096LPK9 316 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 LOC102723532A0A0G2JNH3 316 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 C3orf70A6NLC5 250 aaPredicted RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 KIF28PB7ZC32 967 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 M0QZQ0 153 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 NBNO60934 754 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 TUBB4AP04350 444 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 GYS1P13807 737 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 TACR3P29371 465 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 CCKBRP32239 447 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 RBM6P78332 1123 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 SF3A3Q12874 501 aaKnown RBP eCLIP4.73□□□□□ -1.65
FCF1-204ENST00000553673 SLC14A1Q13336 389 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 RPS6KA2Q15349 733 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 FAM110CQ1W6H9 321 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 BTBD16Q32M84 506 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 RUSC1-AS1Q66K80 236 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 ANKRD40Q6AI12 368 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 SULT6B1Q6IMI4 303 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 LIN54Q6MZP7 749 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 SMC5Q8IY18 1101 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 LAS2Q8IYD9 372 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 OR4N4Q8N0Y3 316 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 NKAPQ8N5F7 415 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 ADPRHL1Q8NDY3 354 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 OR1N1Q8NGS0 311 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 ZNF398Q8TD17 642 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 PNISRQ8TF01 805 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 SORBS1Q9BX66 1292 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 TRIM2Q9C040 744 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 ELAC1Q9H777 363 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 PPCSQ9HAB8 311 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 SAYSD1Q9NPB0 183 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 NDUFAF4Q9P032 175 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 GRHPRQ9UBQ7 328 aa4.73□□□□□ -1.65
FCF1-204ENST00000553673 RPRD2Q5VT52 1461 aaKnown RBP4.73□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3DA0A087WVF3 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3IA0A087WXS9 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3BA6NDS4 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A18PA6NE21 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A16PA6NEW6 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 HMX3A6NHT5 357 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A5PA8MXJ8 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 PPP6R2O75170 966 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 ALDOAP04075 364 aaKnown RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A15PP0C7V4 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 FAM90A14PP0C7W9 464 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 NDUFS1P28331 727 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 GRK5P34947 590 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 HOXD12P35452 270 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 HALP42357 657 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 VPS41P49754 854 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 AGTR2P50052 363 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 KPNB1Q14974 876 aaKnown RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 GORABQ5T7V8 394 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 AWAT2Q6E213 333 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TMEM88Q6PEY1 159 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 C16orf89Q6UX73 402 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 KYAT3Q6YP21 454 aaKnown RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 ANKRD42Q8N9B4 389 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 ASB12Q8WXK4 309 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 ZNF845Q96IR2 970 aaPredicted RBP4.72□□□□□ -1.65
FCF1-204ENST00000553673 C5orf34Q96MH7 638 aa4.72□□□□□ -1.65
FCF1-204ENST00000553673 TRAPPC9Q96Q05 1148 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms