RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	ERLIN2	O94905	339 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	STBD1	O95210	358 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	CXCL10	P02778	98 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ALDH2	P05091	517 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	RPLP2	P05387	115 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	CA3	P07451	260 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	STAG3L1	P0CL83	205 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	XRCC6	P12956	609 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	COMT	P21964	271 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	RPA1	P27694	616 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	CA8	P35219	290 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	MATR3	P43243	847 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	KIR2DL3	P43628	341 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	GPC3	P51654	580 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ATP2C1	P98194	919 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	MGAT3	Q09327	533 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	REST	Q13127	1097 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ORC2	Q13416	577 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	BTG3	Q14201	252 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ACAP1	Q15027	740 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	SPDYA	Q5MJ70	313 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	RRAGB	Q5VZM2	374 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	TWF2	Q6IBS0	349 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	FAM180A	Q6UWF9	173 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	CHST15	Q7LFX5	561 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570		Q8N1X5	172 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	PDILT	Q8N807	584 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	USP38	Q8NB14	1042 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	RNF149	Q8NC42	400 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	NEK9	Q8TD19	979 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	PSPC1	Q8WXF1	523 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	GCDH	Q92947	438 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	IFT74	Q96LB3	600 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	FAM193B	Q96PV7	902 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	C7orf25	Q9BPX7	421 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	APOL6	Q9BWW8	343 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	POLR3F	Q9H1D9	316 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ATP6V0A4	Q9HBG4	840 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	INSL6	Q9Y581	213 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	CFAP20	Q9Y6A4	193 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	ATG2A	Q2TAZ0	1938 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	MYO10	Q9HD67	2058 aa		5.12	□□□□□ -1.59
ATXN3-222	ENST00000553570	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	TBKBP1	A7MCY6	615 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570		H3BML4	177 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570		K7ERI5	159 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	SPTLC2	O15270	562 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	SLC26A4	O43511	780 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	TOX4	O94842	621 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	BMP15	O95972	392 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	MYL1	P05976	194 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	DARS	P14868	501 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	SFPQ	P23246	707 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ECHS1	P30084	290 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	HOXC8	P31273	242 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	LONP1	P36776	959 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RPS19	P39019	145 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ANP32A	P39687	249 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	PRPH	P41219	470 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ME1	P48163	572 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RARRES1	P49788	294 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	GATM	P50440	423 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	PEX3	P56589	373 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	MXD4	Q14582	209 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	KARS	Q15046	597 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	POLN	Q7Z5Q5	900 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RPAIN	Q86UA6	219 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	FAM228A	Q86W67	206 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	CDR2L	Q86X02	465 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	DENND1C	Q8IV53	801 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ZBTB8OS	Q8IWT0	167 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RHOT1	Q8IXI2	618 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	CAMKK1	Q8N5S9	505 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	DEPTOR	Q8TB45	409 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	PHOSPHO2	Q8TCD6	241 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RABGGTA	Q92696	567 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	LPP	Q93052	612 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RAB24	Q969Q5	203 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	CPB2	Q96IY4	423 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	EPSTI1	Q96J88	318 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	OR14A2	Q96R54	314 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	USP28	Q96RU2	1077 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	DMRTA2	Q96SC8	542 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	CDX2	Q99626	313 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	RAD9A	Q99638	391 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	TCHP	Q9BT92	498 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	LRFN3	Q9BTN0	628 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	SARG	Q9BW04	601 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	FTHL17	Q9BXU8	183 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	TRIM6	Q9C030	488 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	NT5C3A	Q9H0P0	336 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	C12orf65	Q9H3J6	166 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	NELFA	Q9H3P2	528 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	ERVK-5	Q9HDB9	667 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	PLA2G3	Q9NZ20	509 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	TRPS1	Q9UHF7	1281 aa		5.11	□□□□□ -1.59
ATXN3-222	ENST00000553570	CFAP45	Q9UL16	551 aa		5.11	□□□□□ -1.59

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