RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TWIST1Q15672 202 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 PRTGQ2VWP7 1150 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 KIAA1755Q5JYT7 1200 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 C6orf10Q5SRN2 563 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 NUGGCQ68CJ6 796 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 HMBOX1Q6NT76 420 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 DDIASQ8IXT1 998 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 TMEM199Q8N511 208 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 MSI2Q96DH6 328 aaKnown RBP7.32□□□□□ -1.24
PCNX1-205ENST00000553508 FAM234AQ9H0X4 552 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 ELAC1Q9H777 363 aaKnown RBP7.32□□□□□ -1.24
PCNX1-205ENST00000553508 DACT1Q9NYF0 836 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 TAGLN3Q9UI15 199 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 HERC5Q9UII4 1024 aaKnown RBP7.32□□□□□ -1.24
PCNX1-205ENST00000553508 PCDHA12Q9UN75 941 aa7.32□□□□□ -1.24
PCNX1-205ENST00000553508 NCAPD3P42695 1498 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 ERCC6Q03468 1493 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 CYP3A7-CYP3A51PA0A087WV96 503 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 A0A0G2JK05 382 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 A6NNC1 897 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 SYT5O00445 386 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 TNFRSF1BP20333 461 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 CYP3A7P24462 503 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 SERPINF1P36955 418 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 ALDH7A1P49419 539 aaKnown RBP7.31□□□□□ -1.24
PCNX1-205ENST00000553508 SMARCA2P51531 1590 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 TRIM14Q14142 442 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 C10orf76Q5T2E6 689 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 SULT6B1Q6IMI4 303 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 KIAA1324Q6UXG2 1013 aaKnown RBP7.31□□□□□ -1.24
PCNX1-205ENST00000553508 RFX8Q6ZV50 586 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 PAQR4Q8N4S7 273 aaPredicted RBP7.31□□□□□ -1.24
PCNX1-205ENST00000553508 EXD3Q8N9H8 876 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 ATP2A3Q93084 1043 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 EID2BQ96D98 161 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 RMDN3Q96TC7 470 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 MLXIPQ9HAP2 919 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 DAPP1Q9UN19 280 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 TNFSF13BQ9Y275 285 aa7.31□□□□□ -1.24
PCNX1-205ENST00000553508 CUX2O14529 1486 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 ZNF335Q9H4Z2 1342 aaPredicted RBP7.3□□□□□ -1.24
PCNX1-205ENST00000553508 ACKR2O00590 384 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 EPN2O95208 641 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 RCAN1P53805 252 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 AP2B1P63010 937 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
PCNX1-205ENST00000553508 GALNT3Q14435 633 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 PIK3CD-AS1Q5SR53 167 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 ISM2Q6H9L7 571 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 NFRKBQ6P4R8 1299 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 RRAGAQ7L523 313 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 MDGA2Q7Z553 956 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 SLC44A2Q8IWA5 706 aaPredicted RBP7.3□□□□□ -1.24
PCNX1-205ENST00000553508 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 RSC1A1Q92681 617 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 C3orf49Q96BT1 292 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 WACQ9BTA9 647 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 EBF3Q9H4W6 596 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 LZTS1Q9Y250 596 aa7.3□□□□□ -1.24
PCNX1-205ENST00000553508 EFCAB8A8MWE9 144 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 MSI1O43347 362 aaKnown RBP7.29□□□□□ -1.24
PCNX1-205ENST00000553508 FGF2P09038 288 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 SNHG28P0DPA3 235 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 PPATQ06203 517 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 CCDC38Q502W7 563 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 LIN54Q6MZP7 749 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 RAB11FIP2Q7L804 512 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 SLC39A13Q96H72 371 aa7.29□□□□□ -1.24
PCNX1-205ENST00000553508 PABPC3Q9H361 631 aaKnown RBP7.29□□□□□ -1.24
PCNX1-205ENST00000553508 HMGXB3Q12766 1538 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 ATG13O75143 517 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 CSTBP04080 98 aaKnown RBP7.28□□□□□ -1.24
PCNX1-205ENST00000553508 PNLIPRP1P54315 467 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 PTGR1Q14914 329 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 SYNE3Q6ZMZ3 975 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 TMEM174Q8WUU8 243 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 CENPIQ92674 756 aaPredicted RBP7.28□□□□□ -1.24
PCNX1-205ENST00000553508 ZNF419Q96HQ0 510 aaPredicted RBP7.28□□□□□ -1.24
PCNX1-205ENST00000553508 PDE11AQ9HCR9 933 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 TXNRD2Q9NNW7 524 aa7.28□□□□□ -1.24
PCNX1-205ENST00000553508 SMARCA4P51532 1647 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 MBD3L5A6NJ08 208 aaPredicted RBP7.27□□□□□ -1.25
PCNX1-205ENST00000553508 MCIDASD6RGH6 385 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 HEXIM1O94992 359 aaKnown RBP7.27□□□□□ -1.25
PCNX1-205ENST00000553508 ADPRHP54922 357 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 FOXG1P55316 489 aaPredicted RBP7.27□□□□□ -1.25
PCNX1-205ENST00000553508 PMPCAQ10713 525 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 BLMHQ13867 455 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 ODF3L2Q3SX64 289 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 GALNTL6Q49A17 601 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 TTLL5Q6EMB2 1281 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 TMEM200AQ86VY9 491 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 WDR83Q9BRX9 315 aaKnown RBP7.27□□□□□ -1.25
PCNX1-205ENST00000553508 PRDM8Q9NQV8 689 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 ARL15Q9NXU5 204 aa7.27□□□□□ -1.25
PCNX1-205ENST00000553508 C19orf53Q9UNZ5 99 aaPredicted RBP7.27□□□□□ -1.25
PCNX1-205ENST00000553508 ATAD2BQ9ULI0 1458 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms