RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 MRPL1Q9BYD6 325 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ELOVL4Q9GZR5 314 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 CXCL16Q9H2A7 254 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 NRDE2Q9H7Z3 1164 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 UBAP1Q9NZ09 502 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SSX2IPQ9Y2D8 614 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 A0A087WZ62 844 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 GLRA3O75311 464 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ATP6V1G1O75348 118 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 C22orf31O95567 290 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 MGAT1P26572 445 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PCLAFQ15004 111 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 TAZQ16635 292 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 KCNT2Q6UVM3 1135 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PLPPR4Q7Z2D5 763 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SLC4A11Q8NBS3 891 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FAM156AQ8NDB6 213 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 NCSTNQ92542 709 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FDXACB1Q9BRP7 624 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 AP4B1Q9Y6B7 739 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 IGKV6-21A0A0C4DH24 114 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FAM159BA6NKW6 160 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FAM189A1O60320 539 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 RGS2P41220 211 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 RPL5P46777 297 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PGGT1BP53609 377 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ABCE1P61221 599 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 OLIG2Q13516 323 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PDK1Q15118 436 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 NRF1Q16656 503 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ZNF513Q8N8E2 541 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 AGAP3Q96P47 875 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SNRNP25Q9BV90 132 aaKnown RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SMARCAD1Q9H4L7 1026 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PCDHA11Q9Y5I1 949 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■■■■ 81.2
HDAC7-230ENST00000552960 TFAP2AP05549 437 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 NFICP08651 508 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 HOXC6P09630 235 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 IL4RP24394 825 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 CYP2F1P24903 491 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 SDC4P31431 198 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ABCD1P33897 745 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ENPEPQ07075 957 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 DBN1Q16643 649 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ACBD5Q5T8D3 534 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 PACS1Q6VY07 963 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ADGRG6Q86SQ4 1221 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 SAPCD2Q86UD0 394 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 CCNYQ8ND76 341 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 TMEM176AQ96HP8 235 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 OR52B2Q96RD2 323 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 CCDC28BQ9BUN5 200 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 Q9H521 79 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 PCDH18Q9HCL0 1135 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 SETD4Q9NVD3 440 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ZDHHC7Q9NXF8 308 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 PLXNB2O15031 1838 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 STX16-NPEPL1H3BU86 382 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 USP12O75317 370 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 GSRP00390 522 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 CPA3P15088 417 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 TFE3P19532 575 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 EPHA3P29320 983 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 GALK1P51570 392 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 AP3M2P53677 418 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 KLF10Q13118 480 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 B3GNT6Q6ZMB0 384 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 TMA16Q96EY4 203 aaKnown RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 SORT1Q99523 831 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 LGMNQ99538 433 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 LHX5Q9H2C1 402 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms