RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 NFKBIBQ15653 356 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 C9orf64Q5T6V5 341 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 NADSYN1Q6IA69 706 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 LAYNQ6UX15 382 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 HJURPQ8NCD3 748 aaPredicted RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 HSFY1Q96LI6 401 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 FBXL12Q9NXK8 326 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 INTS6Q9UL03 887 aaKnown RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 NCKAP1Q9Y2A7 1128 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 KALRNO60229 2985 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 RNASEH1O60930 286 aaKnown RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 SIN3BO75182 1162 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 FBXO21O94952 628 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 CSKP41240 450 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 ST8SIA6P61647 398 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 CYP4F3Q08477 520 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 NUMA1Q14980 2115 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 MAN2A1Q16706 1144 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 INAVAQ3KP66 663 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 TMEM270Q6UE05 265 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 BEND5Q7L4P6 421 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 MARCH9Q86YJ5 346 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 SCUBE3Q8IX30 993 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 MYEOVQ96EZ4 313 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 SLC39A13Q96H72 371 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 FCRL2Q96LA5 508 aaPredicted RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 PRICKLE1Q96MT3 831 aaPredicted RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 NT5C1BQ96P26 610 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 ACE2Q9BYF1 805 aaPredicted RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 EBF2Q9HAK2 575 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.45
CKAP4-202ENST00000552828 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 FZD4Q9ULV1 537 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 TLR6Q9Y2C9 796 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 PTPRBP23467 1997 aa12.27□□□□□ -0.45
CKAP4-202ENST00000552828 LRRC72A6NJI9 287 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 GOLGA8CPA6NN73 597 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 SRPRAP08240 638 aaKnown RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 C1SP09871 688 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 CDK4P11802 303 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 EEF1GP26641 437 aaKnown RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 RGS7P49802 495 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 CCR5P51681 352 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 C21orf59P57076 290 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 RPS24P62847 133 aaKnown RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 MYL5Q02045 173 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 LRMPQ12912 555 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 KCNJ12Q14500 433 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 SHBQ15464 509 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 CST6Q15828 149 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 HSP90AA4PQ58FG1 418 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 TCP11X2Q5H9J9 407 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 FSCBQ5H9T9 825 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 MS4A13Q5J8X5 152 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 NCEH1Q6PIU2 408 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 ADAT2Q7Z6V5 191 aaKnown RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 OR2T34Q8NGX1 318 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 LMO3Q8TAP4 145 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 SAP25Q8TEE9 199 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 CLEC4CQ8WTT0 213 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 SERPINB11Q96P15 392 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 ELF4Q99607 663 aaPredicted RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 TUBGCP2Q9BSJ2 902 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 NEUROG2Q9H2A3 272 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 STIM2Q9P246 746 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 FTSJ1Q9UET6 329 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 TPX2Q9ULW0 747 aaKnown RBP12.26□□□□□ -0.45
CKAP4-202ENST00000552828 ERVW-1Q9UQF0 538 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 ITIH6Q6UXX5 1313 aa12.26□□□□□ -0.45
CKAP4-202ENST00000552828 HELZ2Q9BYK8 2649 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 URB1O60287 2271 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 EDDM13A0A1B0GTR0 161 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 A0A1W2PR77 199 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 SYCE3A1L190 88 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 TYW5A2RUC4 315 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 FAM149AA5PLN7 773 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 M0QYV0 167 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 PIK3R2O00459 728 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 MID1O15344 667 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 WNT1P04628 370 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 GOT1P17174 413 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 SLC8A1P32418 973 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 IL9RQ01113 521 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 VWA3BQ502W6 1294 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms