RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
TUBA1C-209ENST00000552448 EFR3BQ9Y2G0 817 aa11.32□□□□□ -0.6
TUBA1C-209ENST00000552448 FADS3Q9Y5Q0 445 aa11.32□□□□□ -0.6
TUBA1C-209ENST00000552448 SMIM35A0A1B0GVV1 85 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TMEM247A6NEH6 219 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 M0QYV0 167 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 HAS3O00219 553 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 DNAJA2O60884 412 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 RAG1P15918 1043 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 ZNF23P17027 643 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 CYP3A5P20815 502 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 IL1R2P27930 398 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 SLC5A2P31639 672 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 PPARGP37231 505 aaPredicted RBP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 AQP5P55064 265 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TUBA4AP68366 448 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 GSTM4Q03013 218 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TMEM62Q0P6H9 643 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 MFSD10Q14728 455 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TLR1Q15399 786 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TAZQ16635 292 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 RABGAP1LQ5R372 815 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 FBXL19Q6PCT2 694 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 PQLC1Q8N2U9 271 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 FBXW8Q8N3Y1 598 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 METTL25Q8N6Q8 603 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 SGF29Q96ES7 293 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 ABHD8Q96I13 439 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 COX4I2Q96KJ9 171 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 LRGUKQ96M69 825 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 CORO1BQ9BR76 489 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 FAM49AQ9H0Q0 323 aaPredicted RBP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 CDHR5Q9HBB8 845 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 THAP1Q9NVV9 213 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 UBAP1Q9NZ09 502 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 CDH22Q9UJ99 828 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 DERAQ9Y315 318 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 PLLPQ9Y342 182 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 CEPT1Q9Y6K0 416 aa11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 SF3B1O75533 1304 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBA1C-209ENST00000552448 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 PRR5-ARHGAP8B1AHC4 643 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 KRT7P08729 469 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SMIM10L2AP0DMW4 78 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SMIM10L2BP0DMW5 78 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 NKX3-2P78367 333 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ARHGAP8P85298 464 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ZBTB6Q15916 424 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 LCLAT1Q6UWP7 414 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 TMEM110Q86TL2 294 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SLC26A11Q86WA9 606 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 EMC1Q8N766 993 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 GLIS1Q8NBF1 620 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 FBXO27Q8NI29 283 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 UBA3Q8TBC4 463 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SNX27Q96L92 541 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SRPK1Q96SB4 655 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 EIF2AQ9BY44 585 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 GCOM2Q9BZD3 368 aaPredicted RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 KLC2Q9H0B6 622 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 PALMDQ9NP74 551 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 VPS45Q9NRW7 570 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SPATA7Q9P0W8 599 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 PRPF19Q9UMS4 504 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 APOBEC2Q9Y235 224 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 POMPQ9Y244 141 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ZNF711Q9Y462 761 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 RALGAPA2Q2PPJ7 1873 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ITM2AO43736 263 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 CAPNS1P04632 268 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 SNRPAP09012 282 aaKnown RBP11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 CYBAP13498 195 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 HOXD10P28358 340 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 PSEN2P49810 448 aa11.3□□□□□ -0.6
TUBA1C-209ENST00000552448 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms