RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PAX7P23759 505 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 HOXC8P31273 242 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 MCM7P33993 719 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 BMPR1AP36894 532 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 GMFBP60983 142 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 KCNJ10P78508 379 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 BEX3Q00994 111 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TLE1Q04724 770 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ITGA7Q13683 1181 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 BMPR2Q13873 1038 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ICAM4Q14773 271 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RAB39AQ14964 217 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 STILQ15468 1287 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 MED22Q15528 200 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 NTRK2Q16620 822 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 SLC5A9Q2M3M2 681 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 BTBD16Q32M84 506 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ZNF568Q3ZCX4 644 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RAB41Q5JT25 222 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 FAM180AQ6UWF9 173 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 Q6ZVL8 140 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 SPRED1Q7Z699 444 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 CCDC28AQ8IWP9 274 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RHOT2Q8IXI1 618 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 MAML2Q8IZL2 1156 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 MRPL43Q8N983 215 aaKnown RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 CNNM3Q8NE01 707 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 OR5AN1Q8NGI8 311 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 NEK9Q8TD19 979 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RNF139Q8WU17 664 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 LRRC59Q96AG4 307 aaKnown RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 COG3Q96JB2 828 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 NR1H4Q96RI1 486 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 PHF7Q9BWX1 381 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 ACPTQ9BZG2 426 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 VPS16Q9H269 839 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 IL1RAPL2Q9NP60 686 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 LTB4R2Q9NPC1 389 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 CD93Q9NPY3 652 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TCF7L2Q9NQB0 619 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 DLL4Q9NR61 685 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 DDX18Q9NVP1 670 aaKnown RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 RGS17Q9UGC6 210 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 FETUBQ9UGM5 382 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 KCND3Q9UK17 655 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ZDHHC9Q9Y397 364 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 JRKLQ9Y4A0 524 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TRPV2Q9Y5S1 764 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 SESN1Q9Y6P5 492 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 COL15A1P39059 1388 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TMEM94Q12767 1356 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ATP8B3O60423 1300 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RPTORQ8N122 1335 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 A0A1W2PR48 441 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 GLOD5A6NK44 160 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 LIPT2A6NK58 231 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 TMEM232C9JQI7 657 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 TNFSF14O43557 240 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 SLC25A17O43808 307 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 CEP104O60308 925 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 REC8O95072 547 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 NTSR2O95665 410 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 SPARCP09486 303 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 SUPT20HL2P0C7V6 817 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 CKBP12277 381 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RARGP13631 454 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 ARF4P18085 180 aaPredicted RBP4.4□□□□□ -1.7
USP44-208ENST00000552440 KLRK1P26718 216 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 PRDX5P30044 214 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 ADSSP30520 456 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 MTIF2P46199 727 aaKnown RBP4.4□□□□□ -1.7
USP44-208ENST00000552440 RABIFP47224 123 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 CPA2P48052 419 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 CPT1AP50416 773 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RBM5P52756 815 aaKnown RBP eCLIP4.4□□□□□ -1.7
USP44-208ENST00000552440 ANTXR2P58335 489 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 COG7P83436 770 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 MEF2AQ02078 507 aaPredicted RBP4.4□□□□□ -1.7
USP44-208ENST00000552440 NSUN2Q08J23 767 aaKnown RBP eCLIP4.4□□□□□ -1.7
USP44-208ENST00000552440 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.7
USP44-208ENST00000552440 CTBP1Q13363 440 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RCN2Q14257 317 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RPS6KA2Q15349 733 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 SUPT20HL1Q3ZLR7 823 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 TRIM60Q495X7 471 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 ZRANB3Q5FWF4 1079 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 NHSL2Q5HYW2 709 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.4□□□□□ -1.7
USP44-208ENST00000552440 TPGS2Q68CL5 300 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 RSPH3Q86UC2 560 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 DNAAF5Q86Y56 855 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 FAM90A1Q86YD7 464 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 REXO1L1PQ8IX06 675 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 FAM71DQ8N9W8 422 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 POC5Q8NA72 575 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 OR56A3Q8NH54 315 aa4.4□□□□□ -1.7
USP44-208ENST00000552440 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms