RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 SKA1Q96BD8 255 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SPG21Q9NZD8 308 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SPTLC1O15269 473 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 USP17L7P0C7H9 530 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ITGB6P18564 788 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 HK2P52789 917 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ARMC4Q5T2S8 1044 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 KYAT3Q6YP21 454 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 MMADHCQ9H3L0 296 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 MRPL39Q9NYK5 338 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 MEI4A8MW99 385 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 RIPK2O43353 540 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 RGS14O43566 566 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 LTFP02788 710 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SEPHS2Q99611 448 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ADPRHL2Q9NX46 363 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ENTPD4Q9Y227 616 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 EPN2O95208 641 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 AMHP03971 560 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SLC27A1Q6PCB7 646 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 MAGEB10Q96LZ2 347 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ROGDIQ9GZN7 287 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 FANCEQ9HB96 536 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SIK3Q9Y2K2 1263 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 POLR1DQ9Y2S0 133 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF638Q14966 1978 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 UBE2Q2LH0YL09 131 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 CD3EAPO15446 510 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM58BPP0C7Q3 252 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 INSRRP14616 1297 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 MMP13P45452 471 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 GPSM1Q86YR5 675 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 OLFM1Q99784 485 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SEC22BO75396 215 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 BCL10O95999 233 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 AKAP5P24588 427 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 TGFB2P61812 414 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 FNDC3BQ53EP0 1204 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 DHFR2Q86XF0 187 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 ASZ1Q8WWH4 475 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 SEMA4DQ92854 862 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 PPP1R16AQ96I34 528 aa12.74□□□□□ -0.37
RAB3IP-212ENST00000550536 NUDT14O95848 222 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 MFSD10Q14728 455 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 OXNAD1Q96HP4 312 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 IL22Q9GZX6 179 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TNFAIP8O95379 198 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 NPY2RP49146 381 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 CDK7P50613 346 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 CELF6Q96J87 481 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 KLHL25Q9H0H3 589 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 C3P01024 1663 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 NAV1Q8NEY1 1877 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 H3BMM5 538 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 VAV1P15498 845 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 GPATCH2LQ9NWQ4 482 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 DDX20Q9UHI6 824 aaKnown RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TRIM43BA6NCK2 446 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 CCDC149Q6ZUS6 474 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 NACC2Q96BF6 587 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 KLHL1Q9NR64 748 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 ZMYM5Q9UJ78 669 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 NAALADL1Q9UQQ1 740 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 NCKAP1Q9Y2A7 1128 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 PDE5AO76074 875 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TNNI3P19429 210 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 RETSATQ6NUM9 610 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 KRT73Q86Y46 540 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 FBXO25Q8TCJ0 367 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 TYMPP19971 482 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 ELK3P41970 407 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 FAM126BQ8IXS8 530 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 SLITRK2Q9H156 845 aa12.73□□□□□ -0.37
RAB3IP-212ENST00000550536 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms