RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LRRC72A6NJI9 287 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 SIN3BO75182 1162 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 CLDN11O75508 207 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 PROS1P07225 676 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 CD27P26842 260 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ACSL1P33121 698 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 CLCN1P35523 988 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 MATKP42679 507 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 GRIA4P48058 902 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF177Q13360 481 aaPredicted RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ELAVL3Q14576 367 aaKnown RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 TRIP6Q15654 476 aaKnown RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 CLEC17AQ6ZS10 378 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 DSG4Q86SJ6 1040 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC47A2Q86VL8 602 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF366Q8N895 744 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 SNX19Q92543 992 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 MRGPRX3Q96LB0 322 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 PRMT1Q99873 361 aaKnown RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 OMDQ99983 421 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 GAREM1Q9H706 876 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 FBXL12Q9NXK8 326 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 INTS6Q9UL03 887 aaKnown RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ITIH6Q6UXX5 1313 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 PCNX2A6NKB5 2137 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 DAB1O75553 588 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 LSM8O95777 96 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 ADH1BP00325 375 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CYP11B1P15538 503 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 C5AR1P21730 350 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CDH5P33151 784 aaPredicted RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 RACK1P63244 317 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CCDC15Q0P6D6 951 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 KCNJ12Q14500 433 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 DRAP1Q14919 205 aaPredicted RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 TAF5Q15542 800 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CST6Q15828 149 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 HLA-BQ31612 363 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 DPCR1Q3MIW9 517 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FSCBQ5H9T9 825 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 BRMS1LQ5PSV4 323 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 C9orf64Q5T6V5 341 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 KLHDC7AQ5VTJ3 777 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM46CQ5VWP2 391 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 KIAA0895LQ68EN5 471 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FBXL22Q6P050 247 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM183BPQ6ZVS7 135 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 PASD1Q8IV76 773 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 NAXDQ8IW45 347 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 DHX40Q8IX18 779 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CCAR2Q8N163 923 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 OR2T34Q8NGX1 318 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 BIRC7Q96CA5 298 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 C18orf8Q96DM3 657 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 MYO19Q96H55 970 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 RPRD1AQ96P16 312 aaPredicted RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CDC6Q99741 560 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 WDCPQ9H6R7 721 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 CHD8Q9HCK8 2581 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FSCN3Q9NQT6 498 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 TM7SF3Q9NS93 570 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 ADAMTS1Q9UHI8 967 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 WASF3Q9UPY6 502 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
VTI1BP3-201ENST00000550220 SYNJ2BP-COX16A0A087WUM0 186 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SPAARA0A1B0GVQ0 90 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM221BA6H8Z2 402 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 TTC34A8MYJ7 566 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 M0QYT0 321 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 FLRT2O43155 660 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SH3BP5O60239 455 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 GRAP2O75791 330 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 FSBPO95073 299 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 ERBB2P04626 1255 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 UCHL3P15374 230 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 PDGFRAP16234 1089 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 GOT1P17174 413 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC8A1P32418 973 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 NUDT1P36639 197 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 GABRB2P47870 512 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 CSNK1EP49674 416 aaKnown RBP11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 CDH4P55283 916 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 KRT83P78385 493 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 APBA1Q02410 837 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 NME3Q13232 169 aa11.21□□□□□ -0.61
VTI1BP3-201ENST00000550220 AUHQ13825 339 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms