RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TSG101Q99816 390 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 ZSWIM1Q9BR11 485 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 COL5A1P20908 1838 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-205ENST00000548277 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 DFNA5O60443 496 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 IL1BP01584 269 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 MAT2AP31153 395 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 STK19P49842 368 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 NUCB2P80303 420 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 CDH18Q13634 790 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 HNRNPA1L2Q32P51 320 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 INAVAQ3KP66 663 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 DCAF6Q58WW2 860 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 PITRM1Q5JRX3 1037 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 MPP7Q5T2T1 576 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 RRAGAQ7L523 313 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 LGI2Q8N0V4 545 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 AADATQ8N5Z0 425 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 HJURPQ8NCD3 748 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 OR2T34Q8NGX1 318 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 FAM149B1Q96BN6 582 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 COQ4Q9Y3A0 265 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
TRAFD1-205ENST00000548277 A0A087WV48 116 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 IRAK2O43187 625 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 TLX3O43711 291 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 RFPL3O75679 317 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 MOCS3O95396 460 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 ASLP04424 464 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 FYNP06241 537 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 VAV1P15498 845 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 HNF1BP35680 557 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 METAP1P53582 386 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 PPP2CBP62714 309 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 PPP2CAP67775 309 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 FKBP3Q00688 224 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 ECT2LQ008S8 904 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 SFSWAPQ12872 951 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 CNGA2Q16280 664 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 MS4A13Q5J8X5 152 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 SYPL2Q5VXT5 272 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 RNF219Q5W0B1 726 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.439e-6■■□□□ 12.1
TRAFD1-205ENST00000548277 UBR7Q8N806 425 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 DQX1Q8TE96 717 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 IRGQQ8WZA9 623 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 PTPRN2Q92932 1015 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 GDF3Q9NR23 364 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 KIAA1257Q9ULG3 409 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 SCML1Q9UN30 329 aa12.37□□□□□ -0.43
TRAFD1-205ENST00000548277 BPTFQ12830 3046 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 EDDM13A0A1B0GTR0 161 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 A0A1W2PR77 199 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TARSL2A2RTX5 802 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TLR4O00206 839 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 CAPN9O14815 690 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 BNIP3LO60238 219 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 SDC3O75056 442 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 PAEPP09466 180 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 GOT1P17174 413 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TBXAS1P24557 533 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 FMO5P49326 533 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 BECN1Q14457 450 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 ZC3H12AQ5D1E8 599 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TAC4Q86UU9 113 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 SCML4Q8N228 414 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
TRAFD1-205ENST00000548277 LOC400499M0QZD8 3231 aa12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 SLC16A3O15427 465 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-205ENST00000548277 PAPSS1O43252 624 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms