RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 TRANK1O15050 2925 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 FRMPD2Q68DX3 1309 aaPredicted RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 ZNF532Q9HCE3 1301 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 A0A0B4J269 797 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 PNMA6EA0A0J9YXQ4 647 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 ABHD14A-ACY1A0A1B0GW23 586 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 CFAP69A5D8W1 941 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 LOC730098B7Z3J9 87 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 PROB1E7EW31 1015 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 MYO1CO00159 1063 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 TRIAP1O43715 76 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 PEX1O43933 1283 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 DNAJB5O75953 348 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 MBD4O95243 580 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 PARNO95453 639 aaKnown RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 WEE2P0C1S8 567 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 SEC24CP53992 1094 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 TUBB3Q13509 450 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 GPNMBQ14956 572 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 LLGL1Q15334 1064 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 ANGPT1Q15389 498 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 CNN3Q15417 329 aaKnown RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 SPOUT1Q5T280 376 aaKnown RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 Q6ZNX1 250 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 MAEAQ7L5Y9 396 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 LNX2Q8N448 690 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 DBF4BQ8NFT6 615 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 OR6B3Q8NGW1 331 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 SLC30A5Q8TAD4 765 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 CAGE1Q8TC20 777 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 LINC00476Q8WZB0 136 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 MRGPRX1Q96LB2 322 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 HEPHQ9BQS7 1158 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 RIOK1Q9BRS2 568 aaKnown RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 TTYH3Q9C0H2 523 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 PRKRIP1Q9H875 184 aaPredicted RBP4.82□□□□□ -1.64
CBX5-203ENST00000547872 OBP2AQ9NY56 170 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 LRIT1Q9P2V4 623 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 CLIP2Q9UDT6 1046 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 SWAP70Q9UH65 585 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 FBXO40Q9UH90 709 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 ADAMTS5Q9UNA0 930 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 MED16Q9Y2X0 877 aa4.82□□□□□ -1.64
CBX5-203ENST00000547872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.82□□□□□ -1.64
CBX5-203ENST00000547872 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 F5H6K3 240 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 YY2O15391 372 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 PI15O43692 258 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 PRDM1O75626 825 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 ESRRBO95718 433 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 GLP2RO95838 553 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 THP07101 528 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 GATA3P23771 443 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SLC7A1P30825 629 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 ICAM3P32942 547 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 ALDH5A1P51649 535 aaPredicted RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 SATB1Q01826 763 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 KLRC3Q07444 240 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 GRM3Q14832 879 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 CCDC96Q2M329 555 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 LONRF3Q496Y0 759 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 DUSP28Q4G0W2 176 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SLC9C2Q5TAH2 1124 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 NFRKBQ6P4R8 1299 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SEPT14Q6ZU15 432 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 TMPRSS9Q7Z410 1059 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SRGAP1Q7Z6B7 1085 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 KIAA0319LQ8IZA0 1049 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 TOR1AIP2Q8NFQ8 470 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 AFG1LQ8WV93 481 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SLC9A6Q92581 669 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 SLC46A1Q96NT5 459 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 MOGAT1Q96PD6 335 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 PHF7Q9BWX1 381 aaPredicted RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 SLC38A10Q9HBR0 1119 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 HDAC6Q9UBN7 1215 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 HESX1Q9UBX0 185 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 DBNLQ9UJU6 430 aaKnown RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 CCPG1Q9ULG6 757 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 EPN1Q9Y6I3 576 aaPredicted RBP4.81□□□□□ -1.64
CBX5-203ENST00000547872 PLXNA4Q9HCM2 1894 aa4.81□□□□□ -1.64
CBX5-203ENST00000547872 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 ADGRA3Q8IWK6 1321 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 RSPH10B2B2RC85 870 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 GOLIM4O00461 696 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TBC1D4O60343 1298 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 BCAR3O75815 825 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 MMP3P08254 477 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 ATXN1LP0C7T5 689 aaKnown RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 RSPH10BP0C881 870 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TXNP10599 105 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms