RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 ACOT1Q86TX2 421 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 SNX32Q86XE0 403 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 DGCR14Q96DF8 476 aaKnown RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 GPR20Q99678 358 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 C11orf84Q9BUA3 381 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 NME7Q9Y5B8 376 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 USP3Q9Y6I4 520 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 SCN4AP35499 1836 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 MYOCOSA0A1B0GUC4 107 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 RNF103O00237 685 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TOMM70O94826 608 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CLPTM1O96005 669 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 XRCC1P18887 633 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 ABCG1P45844 678 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 GTF2A2P52657 109 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CNGA3Q16281 694 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TDRD5Q8NAT2 981 aaKnown RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CHST13Q8NET6 341 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 SLC35F5Q8WV83 523 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 MOCOSQ96EN8 888 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CERS2Q96G23 380 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 FCRL3Q96P31 734 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 LPIN3Q9BQK8 851 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 PDZD7Q9H5P4 517 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TCF7L2Q9NQB0 619 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 ACSS2Q9NR19 701 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
CACNB3-204ENST00000547230 KIAA1257Q9ULG3 409 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 TMCO1Q9UM00 188 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
CACNB3-204ENST00000547230 CITO14578 2027 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 LTFP02788 710 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 CCDC130P13994 396 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 DESP17661 470 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 MPSTP25325 297 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 MSX2P35548 267 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 PTPN9P43378 593 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 SERPINB8P50452 374 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 MYBPC1Q00872 1141 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 DLG2Q15700 870 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 ISL2Q96A47 359 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 PPP1R36Q96LQ0 422 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 CPNE1Q99829 537 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 RBM38Q9H0Z9 239 aaKnown RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 ASB7Q9H672 318 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 WDR55Q9H6Y2 383 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 CAB39LQ9H9S4 337 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 HOXC10Q9NYD6 342 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 HSFX1Q9UBD0 423 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 APPL1Q9UKG1 709 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 PRPF19Q9UMS4 504 aaKnown RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 G3BP2Q9UN86 482 aaKnown RBP12.97□□□□□ -0.33
CACNB3-204ENST00000547230 RPS6KL1Q9Y6S9 549 aa12.97□□□□□ -0.33
CACNB3-204ENST00000547230 NEMP1O14524 444 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 MCF2P10911 925 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 FLOT2Q14254 428 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 AMHR2Q16671 573 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 ZNF423Q2M1K9 1284 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 RARS2Q5T160 578 aaKnown RBP12.96□□□□□ -0.33
CACNB3-204ENST00000547230 GRTP1Q5TC63 336 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 TICAM1Q8IUC6 712 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 DSELQ8IZU8 1212 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 LILRA2Q8N149 483 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 CENPIQ92674 756 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-204ENST00000547230 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNB3-204ENST00000547230 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-204ENST00000547230 P2RY11Q96G91 374 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 CNBD2Q96M20 576 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 RBBP8Q99708 897 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 MAF1Q9H063 256 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 VPS33BQ9H267 617 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-204ENST00000547230 DPP3Q9NY33 737 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 SEPT10Q9P0V9 454 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 GTF2IRD1Q9UHL9 959 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 RAB26Q9ULW5 256 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
CACNB3-204ENST00000547230 TMEM114B3SHH9 223 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms