RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LAMA5O15230 3695 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SPTBN2O15020 2390 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 RALGAPA1Q6GYQ0 2036 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 A0A0A0MRY4 1105 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ANKRD33BA6NCL7 494 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TMEM8BA6NDV4 472 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF840PA6NDX5 716 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 USP27XA6NNY8 438 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF487B1APH4 448 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 BHMG1C9JSJ3 638 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SLC9A3R1O14745 358 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 HSF2BPO75031 334 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ALDH1A2O94788 518 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PROSCO94903 275 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 RTN3O95197 1032 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 OAS1P00973 400 aaKnown RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 KRT3P12035 628 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 HNRNPLP14866 589 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 JUNDP17535 347 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 BDNFP23560 247 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 RRM1P23921 792 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PCK1P35558 622 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 GRIK1P39086 918 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 P2RY2P41231 377 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PTPN9P43378 593 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 DHPSP49366 369 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF135P52742 658 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 AIF1P55008 147 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 GNG11P61952 73 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SLC6A3Q01959 620 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 MESP2Q0VG99 397 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 LMAN2Q12907 356 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 NNTQ13423 1086 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 DHCR24Q15392 516 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PTPRNQ16849 979 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 MAP7D1Q3KQU3 841 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 MDH1BQ5I0G3 518 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SPDYCQ5MJ68 293 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PEAR1Q5VY43 1037 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PMF1Q6P1K2 205 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 DNAJC24Q6P3W2 148 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 OLFML1Q6UWY5 402 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 MMS22LQ6ZRQ5 1243 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 C12orf40Q86WS4 652 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 XYLT1Q86Y38 959 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SFTPA1Q8IWL2 248 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ADGRG2Q8IZP9 1017 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CCDC33Q8N5R6 958 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ALLCQ8N6M5 410 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 IL17RCQ8NAC3 791 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF564Q8TBZ8 553 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 GATA6Q92908 595 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 NT5C3BQ969T7 300 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PGAP3Q96FM1 320 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 HES6Q96HZ4 224 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 PBKQ96KB5 322 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SPACA7Q96KW9 195 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CDK5RAP1Q96SZ6 601 aaKnown RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TBCBQ99426 244 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CNPY3Q9BT09 278 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 NUP85Q9BW27 656 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 B3GNT5Q9BYG0 378 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 RNF38Q9H0F5 515 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CARD9Q9H257 536 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 DPEP3Q9H4B8 488 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SYNCQ9H7C4 482 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 L2HGDHQ9H9P8 463 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CTTNBP2NLQ9P2B4 639 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TMEM59LQ9UK28 342 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 RALYQ9UKM9 306 aaKnown RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TTC7AQ9ULT0 858 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 EFR3BQ9Y2G0 817 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDCA3-209ENST00000544610 GPSM3Q9Y4H4 160 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CPQQ9Y646 472 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 FREM2Q5SZK8 3169 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 CHD6Q8TD26 2715 aa6.83□□□□□ -1.32
CDCA3-209ENST00000544610 TPRP12270 2363 aaKnown RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 GRID2IPA4D2P6 1211 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 HHLA1C9JL84 531 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 F8VP50 259 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SGK1O00141 431 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PSTPIP1O43586 416 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 BUB1BO60566 1050 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ADAM23O75077 832 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF189O75820 626 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ENDOD1O94919 500 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 KAT7O95251 611 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TOP3BO95985 862 aaKnown RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 F9P00740 461 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 APODP05090 189 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 KRT7P08729 469 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ADH5P11766 374 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SPINK2P20155 84 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ABCB4P21439 1286 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CTNNA2P26232 953 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms