RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SYCP1Q15431 976 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 TAF5Q15542 800 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 ST3GAL2Q16842 350 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 PTPRNQ16849 979 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 HNRNPA1L2Q32P51 320 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 DPCR1Q3MIW9 517 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SLC45A4Q5BKX6 768 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 TCP11X2Q5H9J9 407 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 KLHDC7AQ5VTJ3 777 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 FAM183BPQ6ZVS7 135 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 USP30Q70CQ3 517 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 DSG4Q86SJ6 1040 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SLC47A2Q86VL8 602 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 ZNF677Q86XU0 584 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 DHX40Q8IX18 779 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 FAM71AQ8IYT1 594 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 ZCCHC9Q8N567 271 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 WDTC1Q8N5D0 677 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 ENOX1Q8TC92 643 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 WFDC5Q8TCV5 224 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SETD7Q8WTS6 366 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 P2RY11Q96G91 374 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 RPL10LQ96L21 214 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 CCDC114Q96M63 670 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SLC2A13Q96QE2 648 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 RSPH9Q9H1X1 276 aaPredicted RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 GAREM1Q9H706 876 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SIX2Q9NPC8 291 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 CD93Q9NPY3 652 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 FSCN3Q9NQT6 498 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 SAMSN1Q9NSI8 373 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 FBXL12Q9NXK8 326 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 CYTH4Q9UIA0 394 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 APOBEC2Q9Y235 224 aaKnown RBP7.39□□□□□ -1.23
NUP43-206ENST00000543637 DAAM1Q9Y4D1 1078 aa7.39□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3DA0A087WVF3 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3IA0A087WXS9 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3EA0A087X179 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3KA0A087X1G2 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3FA6NER0 549 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 TTC34A8MYJ7 566 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3LB9A6J9 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 DFNA5O60443 496 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 SIN3BO75182 1162 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 CLDN11O75508 207 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 DAB1O75553 588 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 RNASEH2AO75792 299 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 ADH1BP00325 375 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 IL1BP01584 269 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3HP0C7X1 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 UCHL3P15374 230 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 CYP11B1P15538 503 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 PDGFRAP16234 1089 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 GOT1P17174 413 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 DESP17661 470 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 C5AR1P21730 350 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 CD27P26842 260 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 GABRB2P47870 512 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 CSNK1EP49674 416 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 CLCN6P51797 869 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 PLK1P53350 603 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 CDH4P55283 916 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 C21orf59P57076 290 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 GRIK2Q13002 908 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 AUHQ13825 339 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TRIP6Q15654 476 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 CST6Q15828 149 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 ARL13BQ3SXY8 428 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 FSCBQ5H9T9 825 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 MIIPQ5JXC2 388 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 BRMS1LQ5PSV4 323 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 FAM102AQ5T9C2 384 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 TAF3Q5VWG9 929 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 FAM46CQ5VWP2 391 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 KIAA0895LQ68EN5 471 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3GQ6DHY5 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3CQ6IPX1 549 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 MMS22LQ6ZRQ5 1243 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 SLC26A9Q7LBE3 791 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 MMAAQ8IVH4 418 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 TBC1D3Q8IZP1 549 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 APCDD1Q8J025 514 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 ZNF397Q8NF99 534 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 RHBDD1Q8TEB9 315 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 OR8D1Q8WZ84 308 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 PRICKLE1Q96MT3 831 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 SPAG5Q96R06 1193 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 STK33Q9BYT3 514 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 MUC3BQ9H195 1237 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 PABPC3Q9H361 631 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 C6orf106Q9H6K1 298 aaPredicted RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 PLCB1Q9NQ66 1216 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 TM7SF3Q9NS93 570 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 LMBRD1Q9NUN5 540 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 ANO10Q9NW15 660 aa7.38□□□□□ -1.23
NUP43-206ENST00000543637 XPO7Q9UIA9 1087 aaKnown RBP7.38□□□□□ -1.23
NUP43-206ENST00000543637 VPS28Q9UK41 221 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms