RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 C6orf106Q9H6K1 298 aaPredicted RBP16.15■□□□□ 0.18
VPS33A-206ENST00000542310 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 EIF2B4Q9UI10 523 aaKnown RBP16.15■□□□□ 0.18
VPS33A-206ENST00000542310 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 TMEM8BA6NDV4 472 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 SIN3BO75182 1162 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 ERBB2P04626 1255 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 PROS1P07225 676 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 CDH5P33151 784 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 RDXP35241 583 aaKnown RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 CLCN1P35523 988 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 SCNN1AP37088 669 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 MATKP42679 507 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 GRIA4P48058 902 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 PLK1P53350 603 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 SIM1P81133 766 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 ECT2LQ008S8 904 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 TAF5Q15542 800 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 ZNF423Q2M1K9 1284 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 PTPN20Q4JDL3 420 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 RNF219Q5W0B1 726 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 UNQ6494/PRO21346Q6UXR6 183 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 SLC47A2Q86VL8 602 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 NAXDQ8IW45 347 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 SNX19Q92543 992 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 FZD4Q9ULV1 537 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 TPX2Q9ULW0 747 aaKnown RBP16.14■□□□□ 0.17
VPS33A-206ENST00000542310 NCKAP1Q9Y2A7 1128 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 NEUROG3Q9Y4Z2 214 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 PCDHGB2Q9Y5G2 931 aa16.14■□□□□ 0.17
VPS33A-206ENST00000542310 FRYQ5TBA9 3013 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 DOCK4Q8N1I0 1966 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 SPAARA0A1B0GVQ0 90 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 FOXN3O00409 490 aaPredicted RBP16.13■□□□□ 0.17
VPS33A-206ENST00000542310 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
VPS33A-206ENST00000542310 NOS2P35228 1153 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 SLC6A3Q01959 620 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 TEAD4Q15561 434 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 CST6Q15828 149 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 C9orf64Q5T6V5 341 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 OR6B2Q6IFH4 312 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 DPY19L2P1Q6NXN4 242 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 MMS22LQ6ZRQ5 1243 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 CLEC17AQ6ZS10 378 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 CCAR2Q8N163 923 aaKnown RBP16.13■□□□□ 0.17
VPS33A-206ENST00000542310 TMEM35BQ8NCS4 154 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 PPP1R9BQ96SB3 815 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 TMEM121BQ9BXQ6 578 aaPredicted RBP16.13■□□□□ 0.17
VPS33A-206ENST00000542310 SYNCQ9H7C4 482 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 ADAMTS1Q9UHI8 967 aa16.13■□□□□ 0.17
VPS33A-206ENST00000542310 ASPMQ8IZT6 3477 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 ADH1BP00325 375 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 CD27P26842 260 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 NNMTP40261 264 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 CTSOP43234 321 aaPredicted RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 BNC1Q01954 994 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 KCNJ12Q14500 433 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 ELAVL3Q14576 367 aaKnown RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 C5orf22Q49AR2 442 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 BRMS1LQ5PSV4 323 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 ACBD5Q5T8D3 534 aaPredicted RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 KIAA0895LQ68EN5 471 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 CXorf57Q6NSI4 855 aaKnown RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 FBXL22Q6P050 247 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 GLRX5Q86SX6 157 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 APCDD1Q8J025 514 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 RNF34Q969K3 372 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 BIRC7Q96CA5 298 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 PGAP3Q96FM1 320 aaPredicted RBP16.12■□□□□ 0.17
VPS33A-206ENST00000542310 SCNM1Q9BWG6 230 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 GAREM1Q9H706 876 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 TM9SF3Q9HD45 589 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 FBXL12Q9NXK8 326 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 STAP1Q9ULZ2 295 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
VPS33A-206ENST00000542310 TTC34A8MYJ7 566 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 C10orf142B7Z368 130 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 MID1O15344 667 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 SH3BP5O60239 455 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 GRAP2O75791 330 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 LSM8O95777 96 aaKnown RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 CYP11B1P15538 503 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 PDGFRAP16234 1089 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 GABRB2P47870 512 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 RAPGEF1Q13905 1077 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 DRAP1Q14919 205 aaPredicted RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 KLHDC7AQ5VTJ3 777 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 MSANTD4Q8NCY6 345 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 GATA6Q92908 595 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 RPRD1AQ96P16 312 aaPredicted RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 NPY6RQ99463 290 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 MTG2Q9H4K7 406 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 TM7SF3Q9NS93 570 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 FNDC3AQ9Y2H6 1198 aaKnown RBP16.11■□□□□ 0.17
VPS33A-206ENST00000542310 PCDHB9Q9Y5E1 797 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms