RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 FAM172AQ8WUF8 416 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 RPRD1AQ96P16 312 aaPredicted RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 MCEEQ96PE7 176 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 HAPLN3Q96S86 360 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SELENOOQ9BVL4 669 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 DUSP15Q9H1R2 295 aaPredicted RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 MPP6Q9NZW5 540 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 ZNF212Q9UDV6 495 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SLCO3A1Q9UIG8 710 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
YBX3-212ENST00000542002 OR51B4Q9Y5P0 310 aa10.04□□□□□ -0.8
YBX3-212ENST00000542002 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 E9PAM4 449 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 CCP110O43303 1012 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 SERPING1P05155 500 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 POLR2EP19388 210 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 NDUFV2P19404 249 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 GPD1P21695 349 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 PLK1P53350 603 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 COPAP53621 1224 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 ADKP55263 362 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 CDH18Q13634 790 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 EIF4HQ15056 248 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 ASTE1Q2TB18 679 aaPredicted RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 PLK5Q496M5 336 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 PITRM1Q5JRX3 1037 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 SDE2Q6IQ49 451 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 STRADAQ7RTN6 431 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 AHI1Q8N157 1196 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 PYROXD2Q8N2H3 581 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 WFIKKN2Q8TEU8 576 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 ZC3H10Q96K80 434 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 RPL10LQ96L21 214 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.03□□□□□ -0.8
YBX3-212ENST00000542002 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 OR12D3Q9UGF7 316 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 PLA2G4CQ9UP65 541 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 NEU3Q9UQ49 428 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 TBC1D30Q9Y2I9 924 aa10.03□□□□□ -0.8
YBX3-212ENST00000542002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.86e-8■□□□□ 9.9
YBX3-212ENST00000542002 BZW2Q9Y6E2 419 aaKnown RBP10.03□□□□□ -0.8
YBX3-212ENST00000542002 GPR179Q6PRD1 2367 aa10.02□□□□□ -0.8
YBX3-212ENST00000542002 CFAP54Q96N23 3096 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 A0A0D9SEW6 157 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 TCAF2A6NFQ2 919 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 TTC34A8MYJ7 566 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 NPC1O15118 1278 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 CBFA2T2O43439 604 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 EPHX1P07099 455 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 EIF4A3P38919 411 aaKnown RBP10.02□□□□□ -0.81
YBX3-212ENST00000542002 P2RY2P41231 377 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 STK19P49842 368 aaPredicted RBP10.02□□□□□ -0.81
YBX3-212ENST00000542002 CDH4P55283 916 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PLEKHG6Q3KR16 790 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 FNDC3BQ53EP0 1204 aaKnown RBP10.02□□□□□ -0.81
YBX3-212ENST00000542002 RABGAP1LQ5R372 815 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 MANEALQ5VSG8 457 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
YBX3-212ENST00000542002 SERPINA13PQ6UXR4 307 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 CEP68Q76N32 757 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 UCMAQ8WVF2 138 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PSMB7Q99436 277 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 CHP1Q99653 195 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 CNPY3Q9BT09 278 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 THAP2Q9H0W7 228 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PARD6AQ9NPB6 346 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PRSS16Q9NQE7 514 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 PARVAQ9NVD7 372 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 BCCIPQ9P287 314 aaKnown RBP eCLIP10.02□□□□□ -0.81
YBX3-212ENST00000542002 CNOT8Q9UFF9 292 aaKnown RBP10.02□□□□□ -0.81
YBX3-212ENST00000542002 ERVW-1Q9UQF0 538 aa10.02□□□□□ -0.81
YBX3-212ENST00000542002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 TYW5A2RUC4 315 aaKnown RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 CLDN11O75508 207 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 ALDH1A2O94788 518 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 MT-CO1P00395 513 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
YBX3-212ENST00000542002 C7P10643 843 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 VAV1P15498 845 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 TCF4P15884 667 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 GLDCP23378 1020 aa10.01□□□□□ -0.81
YBX3-212ENST00000542002 ECT2LQ008S8 904 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms