RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TPSB2P20231 275 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 LMAN1P49257 510 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 NUMBP49757 651 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 PSEN1P49768 467 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 TPSAB1Q15661 275 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 TPGS2Q68CL5 300 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 TFAP2DQ7Z6R9 452 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 PDIK1LQ8N165 341 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 FIBCD1Q8N539 461 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 CNTD1Q8N815 330 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 PYROXD1Q8WU10 500 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 MRRFQ96E11 262 aaKnown RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 ZNF512Q96ME7 567 aaPredicted RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 MLPHQ9BV36 600 aaPredicted RBP12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 RNF38Q9H0F5 515 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 ZNF212Q9UDV6 495 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 TBK1Q9UHD2 729 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
AP003559.1-201ENST00000540906 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 EIF3HO15372 352 aaKnown RBP eCLIP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 OPHN1O60890 802 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 TCEA3O75764 348 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 APOEP02649 317 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 C1QAP02745 245 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CNPP09543 421 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 DNAJB1P25685 340 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC6A4P31645 630 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 GUCY1A3Q02108 690 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 PID1Q7Z2X4 250 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 EXOC3L1Q86VI1 746 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 MCUQ8NE86 351 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 MDM1Q8TC05 714 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SIGLEC10Q96LC7 697 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 C1orf74Q96LT6 269 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 AGAP3Q96P47 875 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ROPN1BQ9BZX4 212 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 PHACTR1Q9C0D0 580 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ROPN1Q9HAT0 212 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 OLA1Q9NTK5 396 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 INSL5Q9Y5Q6 135 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 RAD54BQ9Y620 910 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SMAPO00193 183 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 NDC80O14777 642 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 MAFKO60675 156 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 JCHAINP01591 159 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 KLKB1P03952 638 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CTSAP10619 480 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 NFKB1P19838 968 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CA8P35219 290 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SERPINB6P35237 376 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ERVFC1P60507 584 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CRADDP78560 199 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CBLBQ13191 982 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 DNAJB7Q7Z6W7 309 aaPredicted RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 PRPF39Q86UA1 669 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ATP6V0D2Q8N8Y2 350 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 FBF1Q8TES7 1133 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 TTC25Q96NG3 672 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 IGSF9Q9P2J2 1179 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
AP003559.1-201ENST00000540906 IGLV3-10A0A075B6K4 115 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 WASH4PA8MWX3 477 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 PRRG1O14668 218 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 SCAMP3O14828 347 aaKnown RBP12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 TGM5O43548 720 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 USP12O75317 370 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 CSH1P0DML2 217 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 CSH2P0DML3 217 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 MX2P20592 715 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 FDFT1P37268 417 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 PAPOLAP51003 745 aaKnown RBP12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 SGSHP51688 502 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 STAT4Q14765 748 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 PARP6Q2NL67 630 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 FAM133BQ5BKY9 247 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms