RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MYO1AQ9UBC5 1043 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 RAB23Q9ULC3 237 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 SMG5Q9UPR3 1016 aaKnown RBP9.52□□□□□ -0.89
SNHG1-215ENST00000540904 INVSQ9Y283 1065 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.89
SNHG1-215ENST00000540904 A0A087X0T9 212 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 E9PAM4 449 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 DCLK1O15075 740 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 AP5Z1O43299 807 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CCP110O43303 1012 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CNTN5O94779 1100 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 MOCS3O95396 460 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 EPHX1P07099 455 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 DLDP09622 509 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 FAM228BP0C875 321 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 HLA-EP13747 358 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 DESP17661 470 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 GABRG2P18507 467 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 PRKCHP24723 683 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ADRA1BP35368 520 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 OGDHQ02218 1023 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ENPP2Q13822 863 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 STARD3Q14849 445 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 PTPRNQ16849 979 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 USP39Q53GS9 565 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ALFQ53S48 1182 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 PITRM1Q5JRX3 1037 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ACBD5Q5T8D3 534 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 PLEKHA7Q6IQ23 1121 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CXorf57Q6NSI4 855 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 SCYL2Q6P3W7 929 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 SARM1Q6SZW1 724 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 TFAP2DQ7Z6R9 452 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 APCDD1Q8J025 514 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CCDC185Q8N715 623 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF366Q8N895 744 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 SUMF1Q8NBK3 374 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 OR8K1Q8NGG5 319 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CENPIQ92674 756 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 TRIM11Q96F44 468 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CNPY3Q9BT09 278 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 SLC6A17Q9H1V8 727 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ZNHIT6Q9NWK9 470 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 MPP6Q9NZW5 540 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ARHGAP20Q9P2F6 1191 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 CNOT8Q9UFF9 292 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 INTS6Q9UL03 887 aaKnown RBP9.51□□□□□ -0.89
SNHG1-215ENST00000540904 ATG2BQ96BY7 2078 aa9.51□□□□□ -0.89
SNHG1-215ENST00000540904 DRGXA6NNA5 263 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 CLDN11O75508 207 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ASLP04424 464 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 MYBL1P10243 752 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 NDUFV2P19404 249 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 PSMA2P25787 234 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 HNRNPH3P31942 346 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 EIF4A3P38919 411 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 CTSOP43234 321 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ADKP55263 362 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 CDH4P55283 916 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 OXCT1P55809 520 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ST8SIA6P61647 398 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ECT2LQ008S8 904 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 SLC12A1Q13621 1099 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 PLEKHG6Q3KR16 790 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 C5orf22Q49AR2 442 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 CCDC122Q5T0U0 273 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 RNF219Q5W0B1 726 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 RWDD4Q6NW29 188 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ALKBH5Q6P6C2 394 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 KIAA1324Q6UXG2 1013 aaKnown RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 TMC6Q7Z403 805 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-215ENST00000540904 SLFN11Q7Z7L1 901 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 KBTBD6Q86V97 674 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ZNF683Q8IZ20 524 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 OR52K2Q8NGK3 314 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 RLN3Q8WXF3 142 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 TTC17Q96AE7 1141 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 MRGPRX1Q96LB2 322 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 DNAJC7Q99615 494 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 MAGEB5Q9BZ81 275 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 TRIM7Q9C029 511 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 THAP2Q9H0W7 228 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 TMEM245Q9H330 911 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 DEF6Q9H4E7 631 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 CD248Q9HCU0 757 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 ABHD10Q9NUJ1 306 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 NCDNQ9UBB6 729 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 OR12D3Q9UGF7 316 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 SCINQ9Y6U3 715 aa9.5□□□□□ -0.89
SNHG1-215ENST00000540904 IGLV3-10A0A075B6K4 115 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 TMEM191CA6NGB0 347 aa9.49□□□□□ -0.89
SNHG1-215ENST00000540904 AKR1B15C9JRZ8 316 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-215ENST00000540904 FAM72CH0Y354 149 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms