RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SNX10Q9Y5X0 201 aa14.96□□□□□ -0.01
MSRB3-209ENST00000540804 CKAP5Q14008 2032 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 EPG5Q9HCE0 2579 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 GTPBP10A4D1E9 387 aaKnown RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 F5H5T6 163 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 ASLP04424 464 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 IGHV4-34P06331 123 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 C7P10643 843 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 PRKCSHP14314 528 aaPredicted RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 CDK17Q00537 523 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 ECT2LQ008S8 904 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 NME3Q13232 169 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 TRIP6Q15654 476 aaKnown RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 MAN2A1Q16706 1144 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 KIF19Q2TAC6 998 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 VWA3BQ502W6 1294 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 C2CD6Q53TS8 623 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 OTUD1Q5VV17 481 aaPredicted RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 FBXL22Q6P050 247 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 STK40Q8N2I9 435 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 GATA6Q92908 595 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 PTPRN2Q92932 1015 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 RNF34Q969K3 372 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 FAM129BQ96TA1 746 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 NEUROG2Q9H2A3 272 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 NDST4Q9H3R1 872 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 EBF2Q9HAK2 575 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 ANLNQ9NQW6 1124 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 SAMSN1Q9NSI8 373 aaKnown RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 FBXL12Q9NXK8 326 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 KIAA1522Q9P206 1035 aaPredicted RBP14.95□□□□□ -0.02
MSRB3-209ENST00000540804 ZMIZ1Q9ULJ6 1067 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 CEP83Q9Y592 693 aa14.95□□□□□ -0.02
MSRB3-209ENST00000540804 GON4LQ3T8J9 2241 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 I6L893 689 aaPredicted RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 PLK4O00444 970 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 CBFA2T3O75081 653 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 MATKP42679 507 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 PSMD8P48556 350 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 RNASE9P60153 205 aaKnown RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 PTK2Q05397 1052 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 ZBTB16Q05516 673 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 SLC14A1Q13336 389 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 CST6Q15828 149 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 TAF3Q5VWG9 929 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 CXorf57Q6NSI4 855 aaKnown RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 C11orf57Q6ZUT1 292 aaPredicted RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 CCDC117Q8IWD4 279 aaPredicted RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 AADATQ8N5Z0 425 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 ZNF557Q8N988 423 aaPredicted RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 SETD7Q8WTS6 366 aaKnown RBP14.94□□□□□ -0.02
MSRB3-209ENST00000540804 TUBGCP2Q9BSJ2 902 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 TRIM62Q9BVG3 475 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 ZDHHC5Q9C0B5 715 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 FBRSQ9HAH7 460 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 TMPRSS4Q9NRS4 437 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 TM7SF3Q9NS93 570 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 PCOLCE2Q9UKZ9 415 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 VANGL2Q9ULK5 521 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 FHOD1Q9Y613 1164 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 HS3ST4Q9Y661 456 aa14.94□□□□□ -0.02
MSRB3-209ENST00000540804 ASCC3Q8N3C0 2202 aaKnown RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 M0QYT0 321 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 WNT9AO14904 365 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 HSF2BPO75031 334 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 RNASEH2AO75792 299 aaKnown RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SRPRAP08240 638 aaKnown RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 FTH1P19P0C7X4 201 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 ABCB4P21439 1286 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 CCR1P32246 355 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SLC8A1P32418 973 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 KRT9P35527 623 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 AFF3P51826 1226 aaKnown RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 GALCP54803 685 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 IL9RQ01113 521 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SLC6A3Q01959 620 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 AUHQ13825 339 aaKnown RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 DRAP1Q14919 205 aaPredicted RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 TTC31Q49AM3 519 aaPredicted RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 EFHC1Q5JVL4 640 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 PRAMEF14Q5SWL7 426 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 KIAA0895LQ68EN5 471 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 NCEH1Q6PIU2 408 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SLCO6A1Q86UG4 719 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 FAM71AQ8IYT1 594 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 FAM81BQ96LP2 452 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SLC6A18Q96N87 628 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 RPRD1AQ96P16 312 aaPredicted RBP14.93□□□□□ -0.02
MSRB3-209ENST00000540804 PCED1AQ9H1Q7 454 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SGK2Q9HBY8 427 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 ASNSD1Q9NWL6 643 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 SLC12A6Q9UHW9 1150 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 NCKAP1Q9Y2A7 1128 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 ANKRD6Q9Y2G4 727 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 PCDHB9Q9Y5E1 797 aa14.93□□□□□ -0.02
MSRB3-209ENST00000540804 AKAP13Q12802 2813 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms