RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TXNRD3Q86VQ6 643 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 CATSPER3Q86XQ3 398 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 DEFB107AQ8IZN7 70 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 LINC00518Q8N0U6 118 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 PMM1Q92871 262 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 MARC2Q969Z3 335 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 CCDC120Q96HB5 630 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 WWP1Q9H0M0 922 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 HMG20AQ9NP66 347 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 SSU72Q9NP77 194 aaKnown RBP9.68□□□□□ -0.86
CLIP1-214ENST00000540539 AKIP1Q9NQ31 210 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 CYP26B1Q9NR63 512 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 MAT2BQ9NZL9 334 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 TMEM9Q9P0T7 183 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 ANAPC5Q9UJX4 755 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 DUOX1Q9NRD9 1551 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 IQANK1A0A1B0GTG1 560 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 TEX51A0A1B0GUA7 166 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 SPOPO43791 374 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 MAN1A2O60476 641 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 KRT8P05787 483 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 ALAS2P22557 587 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 TTKP33981 857 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 NR2C2P49116 596 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 SRP54P61011 504 aaKnown RBP9.68□□□□□ -0.86
CLIP1-214ENST00000540539 MAPK11Q15759 364 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 IQSEC1Q6DN90 963 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 DENND5BQ6ZUT9 1274 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 C4orf32Q8N8J7 132 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 PDPRQ8NCN5 879 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 FLCNQ8NFG4 579 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 GRPEL2Q8TAA5 225 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 ZFPM2Q8WW38 1151 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 FAM84BQ96KN1 310 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-214ENST00000540539 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 ZSWIM5Q9P217 1185 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 CPNE7Q9UBL6 633 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 CAB39Q9Y376 341 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-214ENST00000540539 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
CLIP1-214ENST00000540539 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 IRS2Q9Y4H2 1338 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 H0YC42 278 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 TM9SF1O15321 606 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 PI15O43692 258 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SORBS3O60504 671 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 NOL3O60936 208 aaKnown RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 IL1BP01584 269 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ETV1P50549 477 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 COPAP53621 1224 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 TPD52P55327 224 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 PPP1R3AQ16821 1122 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 FAM83AQ86UY5 434 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 DGKHQ86XP1 1220 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SLC13A5Q86YT5 568 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ARMC8Q8IUR7 673 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 RELL1Q8IUW5 271 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CARNMT1Q8N4J0 409 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 AFAP1L2Q8N4X5 818 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 FAM47BQ8NA70 645 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 PIK3R3Q92569 461 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SLCO2A1Q92959 643 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ARHGEF26Q96DR7 871 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ZSWIM1Q9BR11 485 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SYT17Q9BSW7 474 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CHID1Q9BWS9 393 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 WDR12Q9GZL7 423 aaKnown RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CPNE5Q9HCH3 593 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 MRPL39Q9NYK5 338 aaKnown RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ACTR3BQ9P1U1 418 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SNED1Q8TER0 1413 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 I3L4J1 428 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 FGF18O76093 207 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 OLFM2O95897 454 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SERPINA6P08185 405 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ATF2P15336 505 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 RRM1P23921 792 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 PRKAA2P54646 552 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CAV1Q03135 178 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 VAC14Q08AM6 782 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CDC20Q12834 499 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SCARF1Q14162 830 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 HERC3Q15034 1050 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 PON2Q15165 354 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ATG16L1Q676U5 607 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ATG14Q6ZNE5 492 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 C15orf52Q6ZUT6 534 aaKnown RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 HAUS6Q7Z4H7 955 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 FBXO33Q7Z6M2 555 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CHSY1Q86X52 802 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 ARID3BQ8IVW6 561 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CPA6Q8N4T0 437 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 AFG1LQ8WV93 481 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 HTRA1Q92743 480 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 INTS12Q96CB8 462 aaKnown RBP9.67□□□□□ -0.86
CLIP1-214ENST00000540539 CEP19Q96LK0 163 aa9.67□□□□□ -0.86
CLIP1-214ENST00000540539 TSNARE1Q96NA8 513 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms