RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 HOXC11O43248 304 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 LRRN2O75325 713 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CYP3A4P08684 503 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CYP3A7P24462 503 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ACAT1P24752 427 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 HPCAL1P37235 193 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 P2RX3P56373 397 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CNTN2Q02246 1040 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CENPCQ03188 943 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CALCRLQ16602 461 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 C15orf59Q2T9L4 293 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZFP1Q6P2D0 407 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TMC5Q6UXY8 1006 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GSTA5Q7RTV2 222 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DSG4Q86SJ6 1040 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CRLF3Q8IUI8 442 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZC3H7AQ8IWR0 971 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TERB1Q8NA31 727 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GPRC5AQ8NFJ5 357 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GIPC2Q8TF65 315 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TFB1MQ8WVM0 346 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 SERAC1Q96JX3 654 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 C1orf50Q9BV19 199 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TRIT1Q9H3H1 467 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 FETUBQ9UGM5 382 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 COL11A1P12107 1806 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 A0A0B4J269 797 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 AP3B1O00203 1094 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PLOD2O00469 737 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 SCO2O43819 266 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ALX3O95076 343 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 KLHL2O95198 593 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MCF2P10911 925 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GLULP15104 373 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PTPN1P18031 435 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 NMT1P30419 496 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 SSTR1P30872 391 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 IDUAP35475 653 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 NFATC3Q12968 1075 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 NME3Q13232 169 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TUBB3Q13509 450 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 INAVAQ3KP66 663 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ATAD3BQ5T9A4 648 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ARHGEF16Q5VV41 709 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DCP2Q8IU60 420 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GLIS1Q8NBF1 620 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MINDY2Q8NBR6 621 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GABPB2Q8TAK5 448 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 HAS1Q92839 578 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 E2F7Q96AV8 911 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 LENG9Q96B70 501 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 HHIPL1Q96JK4 782 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF597Q96LX8 424 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MBOAT7Q96N66 472 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PARK7Q99497 189 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 NPLQ9BXD5 320 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 HEMGNQ9BXL5 484 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZHX3Q9H4I2 956 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CNOT11Q9UKZ1 510 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ANGPTL3Q9Y5C1 460 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 LOC100653049A0A140TA62 436 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 FOXN3O00409 490 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TNPO2O14787 897 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ZMPSTE24O75844 475 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 KRT34O76011 436 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 SLC25A27O95847 323 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GRK2P25098 689 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 S100A5P33763 92 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ARL1P40616 181 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MLLT10P55197 1068 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PHC1P78364 1004 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 RALGDSQ12967 914 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PMS2P3Q13401 168 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PTK2BQ14289 1009 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PPP2R5DQ14738 602 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CHI3L2Q15782 390 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DEFB115Q30KQ5 88 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 MGAT5BQ3V5L5 792 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TEX44Q53QW1 395 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TJAP1Q5JTD0 557 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM182AQ5T1J6 154 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ATG16L1Q676U5 607 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 FRMD7Q6ZUT3 714 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 TMEM102Q8N9M5 508 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 ATL1Q8WXF7 558 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DHRS9Q9BPW9 319 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PDCD2LQ9BRP1 358 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 OSBPL11Q9BXB4 747 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 C20orf27Q9GZN8 174 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 PXMP2Q9NR77 195 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 KLQ9UEF7 1012 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 FBXO40Q9UH90 709 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CPA4Q9UI42 421 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 IGLV3-22A0A075B6J6 115 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms