RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CUL3Q13618 768 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 CFAP157Q5JU67 520 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 RWDD4Q6NW29 188 aaKnown RBP14□□□□□ -0.17
BNIP3-202ENST00000540159 HPS6Q86YV9 775 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 MCUQ8NE86 351 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 PPP4R1Q8TF05 950 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 CCDC106Q9BWC9 280 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 IARS2Q9NSE4 1012 aaKnown RBP14□□□□□ -0.17
BNIP3-202ENST00000540159 SLC39A10Q9ULF5 831 aa14□□□□□ -0.17
BNIP3-202ENST00000540159 CCL15-CCL14A0A0B4J2E2 113 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 MYBPHLA2RUH7 354 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CASTOR2A6NHX0 329 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TK2O00142 265 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SIN3BO75182 1162 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 GPR32O75388 356 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 RALBP11234 206 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CCNFP41002 786 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 PTPN9P43378 593 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TAF6P49848 677 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CCL15Q16663 113 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CCNJLQ8IV13 435 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SPATA22Q8NHS9 363 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 MAPK15Q8TD08 544 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CERS2Q96G23 380 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 MAP3K7O43318 606 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SNNO75324 88 aaPredicted RBP13.99□□□□□ -0.17
BNIP3-202ENST00000540159 MYL3P08590 195 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TSHRP16473 764 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TPSB2P20231 275 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SERPINB6P35237 376 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SNAPC2Q13487 334 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TPSAB1Q15661 275 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SLC25A52Q3SY17 297 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 FSTL4Q6MZW2 842 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 OTOP3Q7RTS5 596 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 DEFB107AQ8IZN7 70 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.99□□□□□ -0.175e-8■■■□□ 15.3
BNIP3-202ENST00000540159 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 C20orf96Q9NUD7 363 aaPredicted RBP13.99□□□□□ -0.17
BNIP3-202ENST00000540159 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
BNIP3-202ENST00000540159 USP3Q9Y6I4 520 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 LUC7L3O95232 432 aaKnown RBP13.99□□□□□ -0.17
BNIP3-202ENST00000540159 HSPA4LO95757 839 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 JCHAINP01591 159 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 PRKCGP05129 697 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 TPI1P60174 286 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 ZBTB17Q13105 803 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 ZBTB6Q15916 424 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SLC9B1Q4ZJI4 515 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 PPM1LQ5SGD2 360 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 GPR142Q7Z601 462 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 SORT1Q99523 831 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 OMDQ99983 421 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 C11orf84Q9BUA3 381 aaPredicted RBP13.99□□□□□ -0.17
BNIP3-202ENST00000540159 BATF3Q9NR55 127 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 KCNH4Q9UQ05 1017 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
BNIP3-202ENST00000540159 CFLARO15519 480 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 POLBP06746 335 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 ANPEPP15144 967 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 NFKB1P19838 968 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 IDH3AP50213 366 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 DCAF4L1Q3SXM0 396 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 C9orf131Q5VYM1 1079 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 PDPK2PQ6A1A2 396 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 NXNQ6DKJ4 435 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 ZNF280DQ6N043 979 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 PAQR9Q6ZVX9 377 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 RPS27LQ71UM5 84 aaKnown RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 OLFM3Q96PB7 478 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 APBA2Q99767 749 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 DDX43Q9NXZ2 648 aaKnown RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 COPG2Q9UBF2 871 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 VANGL2Q9ULK5 521 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 IPPQ9Y573 584 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 A0A096LPK6 155 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 DFFAO00273 331 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 TXNDC9O14530 226 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 AIM2O14862 343 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 KLF11O14901 512 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 SMIM24O75264 130 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 AP1G2O75843 785 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 DARSP14868 501 aaKnown RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 ZFXP17010 805 aaPredicted RBP13.98□□□□□ -0.17
BNIP3-202ENST00000540159 EPHA3P29320 983 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 NR2C2P49116 596 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 NIPAL4Q0D2K0 466 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 ITGA7Q13683 1181 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 POU6F1Q14863 301 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 SNX17Q15036 470 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 TMEM198Q66K66 360 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 FRMD7Q6ZUT3 714 aa13.98□□□□□ -0.17
BNIP3-202ENST00000540159 CENPIQ92674 756 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms