RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NME7Q9Y5B8 376 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 F5H423 210 aaPredicted RBP9.9□□□□□ -0.83
CDH13-204ENST00000539548 THRAP10827 490 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 MLH1P40692 756 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 USP4Q13107 963 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 SNAPC2Q13487 334 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 SLC9B1Q4ZJI4 515 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 NAPRTQ6XQN6 538 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 CLEC14AQ86T13 490 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 TMEM126BQ8IUX1 230 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 PLD6Q8N2A8 252 aaKnown RBP9.9□□□□□ -0.83
CDH13-204ENST00000539548 PYROXD2Q8N2H3 581 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 PQLC1Q8N2U9 271 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 MARVELD2Q8N4S9 558 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 EFCAB3Q8N7B9 438 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 ZNF781Q8N8C0 355 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 ANKRD52Q8NB46 1076 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 HIPK4Q8NE63 616 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.83
CDH13-204ENST00000539548 KIF12Q96FN5 646 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 FCRL3Q96P31 734 aaPredicted RBP9.9□□□□□ -0.83
CDH13-204ENST00000539548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.9□□□□□ -0.83
CDH13-204ENST00000539548 IGSF9Q9P2J2 1179 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 VPS28Q9UK41 221 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 FZD10Q9ULW2 581 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 INPP5FQ9Y2H2 1132 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 DTNAQ9Y4J8 743 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.83
CDH13-204ENST00000539548 KPNA7A9QM74 516 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 ATP9BO43861 1147 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 MFSD11O43934 449 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 TRIM13O60858 407 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 ZMPSTE24O75844 475 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 FBXO21O94952 628 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 INSRRP14616 1297 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 PSMB4P28070 264 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 LIMK2P53671 638 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
CDH13-204ENST00000539548 PEX6Q13608 980 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 PDK1Q15118 436 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 FBXL19Q6PCT2 694 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 ZNF567Q8N184 647 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 SLC7A14Q8TBB6 771 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 COPS5Q92905 334 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 CNDP1Q96KN2 507 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 LENG8Q96PV6 779 aaPredicted RBP9.89□□□□□ -0.83
CDH13-204ENST00000539548 SERPINI1Q99574 410 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 NDNQ99608 321 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 LRRC40Q9H9A6 602 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 PIH1D1Q9NWS0 290 aaKnown RBP9.89□□□□□ -0.83
CDH13-204ENST00000539548 ERAP1Q9NZ08 941 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 DERAQ9Y315 318 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
CDH13-204ENST00000539548 ZNF638Q14966 1978 aaKnown RBP9.89□□□□□ -0.83
CDH13-204ENST00000539548 A0A1B0GVG6 124 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 RGSL1A5PLK6 1076 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 E9PBE3 544 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 PDLIM1O00151 329 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 SLC22A2O15244 555 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 KLHL41O60662 606 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GMPRP36959 345 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GRM5P41594 1212 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ACADSBP45954 432 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 HK2P52789 917 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 BCAT1P54687 386 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 IGBP1P78318 339 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 IFRD2Q12894 506 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GRAMD1BQ3KR37 738 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 BSPRYQ5W0U4 402 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 FSTL4Q6MZW2 842 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 CES3Q6UWW8 571 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 C16orf89Q6UX73 402 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 CMC1Q7Z7K0 106 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TNS4Q8IZW8 715 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TDRD5Q8NAT2 981 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 KYQ8NBH2 561 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 MAPK15Q8TD08 544 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 STON2Q8WXE9 905 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 DGCR14Q96DF8 476 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 OR52B2Q96RD2 323 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 LPIN3Q9BQK8 851 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 OXCT2Q9BYC2 517 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 ILKAPQ9H0C8 392 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 Q9H521 79 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 PLEKHA5Q9HAU0 1116 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TCF7L2Q9NQB0 619 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 BCAP29Q9UHQ4 241 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 RAB26Q9ULW5 256 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 A0A096LPK6 155 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 C15orf38-AP3S2A0A0A6YYH1 394 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 CAPN8A6NHC0 703 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 NFKBIEO00221 500 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 MATN2O00339 956 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms