RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 RNF103O00237 685 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 SMPD1P17405 629 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 GRK2P25098 689 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PTPN3P26045 913 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 MGAT1P26572 445 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 ARNTP27540 789 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CPA2P48052 419 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 ABCE1P61221 599 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 GRIK4Q16099 956 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 SPANXN3Q5MJ09 141 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 SYPL2Q5VXT5 272 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CCDC117Q8IWD4 279 aaPredicted RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 GALNT15Q8N3T1 639 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 NME8Q8N427 588 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PDCD7Q8N8D1 485 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 ZMIZ2Q8NF64 920 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 HMGCLL1Q8TB92 370 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 HAPLN3Q96S86 360 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CPNE1Q99829 537 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 DUSP16Q9BY84 665 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 EPB41L1Q9H4G0 881 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 MRM3Q9HC36 420 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 FAM49BQ9NUQ9 324 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PNPOQ9NVS9 261 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 ZNF358Q9NW07 568 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CDH22Q9UJ99 828 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 NRCAMQ92823 1304 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 GRID2O43424 1007 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 FKBP6O75344 327 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 LYNP07948 512 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PSMB4P28070 264 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 DPP6P42658 865 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 ACADSBP45954 432 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CDK7P50613 346 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 IRX1P78414 480 aaPredicted RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 GRTP1Q5TC63 336 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 LGSNQ5TDP6 509 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 METTL21CQ5VZV1 264 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PM20D1Q6GTS8 502 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 FSTL4Q6MZW2 842 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 FBXL19Q6PCT2 694 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 UGT2A3Q6UWM9 527 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CLEC20AQ6ZU45 233 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CRLF3Q8IUI8 442 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 SCML4Q8N228 414 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 NLGN2Q8NFZ4 835 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 HDAC11Q96DB2 347 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 CERS2Q96G23 380 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 PPP1R10Q96QC0 940 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 SNX15Q9NRS6 342 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 GNEQ9Y223 722 aaKnown RBP7.11□□□□□ -1.27
PROM1-219ENST00000539194 DNAJC16Q9Y2G8 782 aa7.11□□□□□ -1.27
PROM1-219ENST00000539194 SMIM28A0A1B0GU29 152 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 H3BRB1 525 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 MATN2O00339 956 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 PTGESO14684 152 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 F2P00734 622 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SMIM18P0DKX4 95 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 HOXC13P31276 330 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 ARCN1P48444 511 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 XIAPP98170 497 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 GALNT2Q10471 571 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SNAPC2Q13487 334 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 IRF5Q13568 498 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 CCDC153Q494R4 210 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SFT2D3Q587I9 215 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 DENND5AQ6IQ26 1287 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 TMEM154Q6P9G4 183 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 PELI3Q8N2H9 469 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SMC1BQ8NDV3 1235 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 RNF139Q8WU17 664 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 DNAI2Q9GZS0 605 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 ZNF106Q9H2Y7 1883 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 NXF3Q9H4D5 531 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 TUT1Q9H6E5 874 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 ELP3Q9H9T3 547 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 PLXNA4Q9HCM2 1894 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 CSNK1G1Q9HCP0 422 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 OXSMQ9NWU1 459 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.1□□□□□ -1.27
PROM1-219ENST00000539194 SNX9Q9Y5X1 595 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 TMEM114B3SHH9 223 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SLC22A2O15244 555 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 DARSP14868 501 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 RPL10AP62906 217 aaKnown RBP7.1□□□□□ -1.27
PROM1-219ENST00000539194 ZBTB17Q13105 803 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 PRKG1Q13976 671 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 GRB14Q14449 540 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 DUSP28Q4G0W2 176 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 SLC9B1Q4ZJI4 515 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 MANEALQ5VSG8 457 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 RFX8Q6ZV50 586 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
PROM1-219ENST00000539194 MOB2Q70IA6 237 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms