RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CRYMQ14894 314 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DLGAP5Q15398 846 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ELAVL1Q15717 326 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 GEN1Q17RS7 908 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RBM20Q5T481 1227 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DEPDC1Q5TB30 811 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RGS7BPQ6MZT1 257 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TTLL10Q6ZVT0 673 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RNF144BQ7Z419 303 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 GALNT5Q7Z7M9 940 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CHD1LQ86WJ1 897 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CNTROBQ8N137 903 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 Q8NFD4 153 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MYCBPAPQ8TBZ2 947 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LRRC59Q96AG4 307 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZUFSPQ96AP4 578 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RNF183Q96D59 192 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TRMT61AQ96FX7 289 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MAELQ96JY0 434 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PDCL3Q9H2J4 239 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TAF1DQ9H5J8 278 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 HEYLQ9NQ87 328 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PIH1D3Q9NQM4 214 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ASAH2Q9NR71 780 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF212Q9UDV6 495 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PRKDCP78527 4128 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 A0A1W2PPH5 198 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 A8MZ25 164 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LAMTOR5O43504 91 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SPRY2O43597 315 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 STX6O43752 255 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TMPRSS11DO60235 418 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PRAMEF2O60811 474 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FAM20BO75063 409 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 JTBO76095 146 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RECQL5O94762 991 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ACTL6BO94805 426 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 EGR2P11161 476 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RXRAP19793 462 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 HOXC8P31273 242 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KRT9P35527 623 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ALDH18A1P54886 795 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 EIF3BP55884 814 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DGCR2P98153 550 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZBTB16Q05516 673 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 EIF4A2Q14240 407 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CSHL1Q14406 222 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 GRM7Q14831 915 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 R3HDM1Q15032 1099 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KCNA10Q16322 511 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TSTQ16762 297 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF667Q5HYK9 610 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LY6G5CQ5SRR4 150 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KRT40Q6A162 431 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC144NLQ6NUI1 221 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF474Q6S9Z5 364 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF813Q6ZN06 617 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 C2CD5Q86YS7 1000 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LURAP1LQ8IV03 231 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FAM9BQ8IZU0 186 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FSIP1Q8NA03 581 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CAGE1Q8TC20 777 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CREB3L4Q8TEY5 395 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 AFG1LQ8WV93 481 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ATG4AQ8WYN0 398 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TFAP2CQ92754 450 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 COG8Q96MW5 612 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MLST8Q9BVC4 326 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 VN1R3Q9BXE9 311 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 HDHD5Q9BXW7 423 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SIL1Q9H173 461 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 XYLT2Q9H1B5 865 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SLC25A32Q9H2D1 315 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LIN7CQ9NUP9 197 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KCTD5Q9NXV2 234 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NCKIPSDQ9NZQ3 722 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NDRG4Q9ULP0 352 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CNTN6Q9UQ52 1028 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DRG1Q9Y295 367 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RAD54BQ9Y620 910 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CYP46A1Q9Y6A2 500 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SLC4A4Q9Y6R1 1079 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A7PA6NKC0 464 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A22PA8MWA6 464 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A12PA8MX19 464 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A23PA8MXZ1 464 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 POC1B-GALNT4F8VUJ3 575 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 LDLRAD4O15165 306 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CTIFO43310 598 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CCNT1O60563 726 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 PLOD3O60568 738 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 USO1O60763 962 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 F9P00740 461 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 IL6RP08887 468 aaPredicted RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 VDRP11473 427 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 KRT10P13645 584 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 PPP3CBP16298 524 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 XBP1P17861 261 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 RBL1P28749 1068 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 COPB2P35606 906 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms