RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 STOML2Q9UJZ1 356 aa10.39□□□□□ -0.75
LDHA-216ENST00000538451 VANGL2Q9ULK5 521 aa10.39□□□□□ -0.75
LDHA-216ENST00000538451 MYO9BQ13459 2157 aa10.39□□□□□ -0.75
LDHA-216ENST00000538451 IGLV3-10A0A075B6K4 115 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 ARHGAP42A6NI28 874 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 WASH4PA8MWX3 477 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 SGK1O00141 431 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 LEFTY2O00292 366 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 LIASO43766 372 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 NEBLO76041 1014 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 RBP3P10745 1247 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 GJA1P17302 382 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 OR1E1P30953 314 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 NDST2P52849 883 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 VCPP55072 806 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 CDH4P55283 916 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 YBEYP58557 167 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 ZNF177Q13360 481 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 NOMO1Q15155 1222 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 ANO4Q32M45 955 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 MPPE1Q53F39 396 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 MPP7Q5T2T1 576 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 HEATR6Q6AI08 1181 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 C1orf228Q6PIY5 440 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 CHST9Q7L1S5 443 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 LGI2Q8N0V4 545 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 CPXM2Q8N436 756 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 C12orf76Q8N812 135 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 RTL3Q8N8U3 475 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 HJURPQ8NCD3 748 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 CCNYQ8ND76 341 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 TTC16Q8NEE8 873 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 SH3RF2Q8TEC5 729 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 C1orf54Q8WWF1 131 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 SLCO2A1Q92959 643 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 LRRC45Q96CN5 670 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 PABPC5Q96DU9 382 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 TMA16Q96EY4 203 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 FAM129AQ9BZQ8 928 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 TMEM248Q9NWD8 314 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 OBP2AQ9NY56 170 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 SMARCAL1Q9NZC9 954 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 AGO1Q9UL18 857 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 HPCAL4Q9UM19 191 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 UNC80Q8N2C7 3258 aa10.38□□□□□ -0.75
LDHA-216ENST00000538451 PRRC2BQ5JSZ5 2229 aaKnown RBP10.38□□□□□ -0.75
LDHA-216ENST00000538451 A0A1B0GVM2 712 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 TCAF2A6NFQ2 919 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 DRGXA6NNA5 263 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 DCLK1O15075 740 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 ERLIN1O75477 346 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 KCNA5P22460 613 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 GTF2F1P35269 517 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDHA-216ENST00000538451 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 SNX1Q13596 522 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 PUS10Q3MIT2 529 aaKnown RBP10.37□□□□□ -0.75
LDHA-216ENST00000538451 PARP15Q460N3 678 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 MAP9Q49MG5 647 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 PIK3R6Q5UE93 754 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 MANEALQ5VSG8 457 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 NCBP2-AS2Q69YL0 99 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 FBXL22Q6P050 247 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 ZNF783Q6ZMS7 281 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 CEP128Q6ZU80 1094 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 PCGF5Q86SE9 256 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 SETD3Q86TU7 594 aaPredicted RBP10.37□□□□□ -0.75
LDHA-216ENST00000538451 ZC3H18Q86VM9 953 aaKnown RBP10.37□□□□□ -0.75
LDHA-216ENST00000538451 ZNF354CQ86Y25 554 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 ARID3BQ8IVW6 561 aaPredicted RBP10.37□□□□□ -0.75
LDHA-216ENST00000538451 BBS5Q8N3I7 341 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 ZSCAN18Q8TBC5 510 aaPredicted RBP10.37□□□□□ -0.75
LDHA-216ENST00000538451 ADAMTS19Q8TE59 1207 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDHA-216ENST00000538451 SMARCD2Q92925 531 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 TCEAL4Q96EI5 215 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 PPP1R2P1Q96PQ5 205 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 VAT1Q99536 393 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 TMPRSS4Q9NRS4 437 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 AMACRQ9UHK6 382 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 CDH7Q9ULB5 785 aa10.37□□□□□ -0.75
LDHA-216ENST00000538451 TRANK1O15050 2925 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 TCRBV7S2A1N4TA0A589 114 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 BCLAF3A2AJT9 711 aaKnown RBP10.36□□□□□ -0.75
LDHA-216ENST00000538451 GOLGA6CA6NDK9 693 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 GOLGA6BA6NDN3 693 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 FAM72CH0Y354 149 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 H0Y626 953 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 SMAPO00193 183 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 RAMP2O60895 175 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 HEXIM1O94992 359 aaKnown RBP10.36□□□□□ -0.75
LDHA-216ENST00000538451 GLP2RO95838 553 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 RHOXF2BP0C7M4 288 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 GOLGA6DP0CG33 693 aa10.36□□□□□ -0.75
LDHA-216ENST00000538451 BMP1P13497 986 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms