RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DCLRE1AQ6PJP8 1040 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
LIMK1-208ENST00000538333 OR52K1Q8NGK4 314 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 CDKL2Q92772 493 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 SUSD3Q96L08 255 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 GBA3Q9H227 469 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 ZFP69BQ9UJL9 534 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 TLL2Q9Y6L7 1015 aa14.37□□□□□ -0.11
LIMK1-208ENST00000538333 A0A0G2JND7 137 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 F8W810 466 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 INPPL1O15357 1258 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 MTSS1O43312 755 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 NEFHP12036 1026 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 MX2P20592 715 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 PAX3P23760 479 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 EPHB2P29323 1055 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SERPINB6P35237 376 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 BST1Q10588 318 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SWT1Q5T5J6 900 aaKnown RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF449Q6P9G9 518 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TRIM42Q8IWZ5 723 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 STKLD1Q8NE28 680 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SCAMP5Q8TAC9 235 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 ACMSDQ8TDX5 336 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 INPP5DQ92835 1189 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 UROC1Q96N76 676 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 FCRL3Q96P31 734 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TMEM237Q96Q45 408 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 MLPHQ9BV36 600 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 CASS4Q9NQ75 786 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 BAIAP2L1Q9UHR4 511 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TTC3P53804 2025 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TRAFD1O14545 582 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 CBX6O95503 412 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 GSRP00390 522 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 POLBP06746 335 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 ARFIP2P53365 341 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 OCRLQ01968 901 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SPANXN3Q5MJ09 141 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 STXBP5Q5T5C0 1151 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 E2F7Q96AV8 911 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SKA1Q96BD8 255 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 CERS2Q96G23 380 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 AGAP3Q96P47 875 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 PGLYRP2Q96PD5 576 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 SAR1AQ9NR31 198 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
LIMK1-208ENST00000538333 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 TRHDEQ9UKU6 1024 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 RPS6KL1Q9Y6S9 549 aa14.36□□□□□ -0.11
LIMK1-208ENST00000538333 HTTP42858 3142 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 ERI2A8K979 691 aaKnown RBP14.35□□□□□ -0.11
LIMK1-208ENST00000538333 A8MUI8 341 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 BIRC5O15392 142 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 DNAJC6O75061 913 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 USP12O75317 370 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 BPGMP07738 259 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 ITGA2BP08514 1039 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 TYMPP19971 482 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 ARTNQ5T4W7 220 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 CES3Q6UWW8 571 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 TMEM135Q86UB9 458 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 RAB3IL1Q8TBN0 382 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 VAT1Q99536 393 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 IL1RAPL1Q9NZN1 696 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 HEY2Q9UBP5 337 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 EMCNQ9ULC0 261 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 MTO1Q9Y2Z2 717 aaKnown RBP14.35□□□□□ -0.11
LIMK1-208ENST00000538333 MYO16Q9Y6X6 1858 aa14.35□□□□□ -0.11
LIMK1-208ENST00000538333 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
LIMK1-208ENST00000538333 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TPP1O14773 563 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 KIF3CO14782 793 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 IRAK2O43187 625 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 B4GALT3O60512 393 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 SNNO75324 88 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 SKIP12755 728 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 PDE1CQ14123 709 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 MAPRE1Q15691 268 aaKnown RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 CHI3L2Q15782 390 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 HSF5Q4G112 596 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 KYAT3Q6YP21 454 aaKnown RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 NUDCD3Q8IVD9 361 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TRIM62Q9BVG3 475 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 LNPEPQ9UIQ6 1025 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 VANGL2Q9ULK5 521 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 STK38LQ9Y2H1 464 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 ZCWPW2A0A1B0GU75 182 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TMEM88BA6NKF7 163 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms