RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 H0Y626 953 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GOLGA8SH3BPF8 625 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 M0QYT0 321 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TRDMT1O14717 391 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TNFRSF10BO14763 440 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 MDM4O15151 490 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PFDN6O15212 129 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SLC7A4O43246 635 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SGTAO43765 313 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CPP00450 1065 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RHOCP08134 193 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 OR4Q2P0C623 313 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC159P0C7I6 412 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 BMP1P13497 986 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CEBPBP17676 345 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 XPAP23025 273 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DNAJB1P25685 340 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PBX1P40424 430 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NR2C2P49116 596 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DGKGP49619 791 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 VAV2P52735 878 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NDST2P52849 883 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 STARD6P59095 220 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TPI1P60174 286 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SCAPQ12770 1279 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 KCNMA1Q12791 1236 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 HNRNPDQ14103 355 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PRPSAP1Q14558 356 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ELF2Q15723 593 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF77Q15935 545 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ITPRIPL1Q6GPH6 555 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PLEKHA7Q6IQ23 1121 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FIP1L1Q6UN15 594 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 UNC5DQ6UXZ4 953 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 Q7L0L9 218 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SDCCAG8Q86SQ7 713 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RCOR2Q8IZ40 523 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SPEM1Q8N4L4 309 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TMCO5AQ8N6Q1 288 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 UBA3Q8TBC4 463 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 HCAR2Q8TDS4 363 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DQX1Q8TE96 717 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DDI1Q8WTU0 396 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FAM3CQ92520 227 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 EEF2KMTQ96G04 330 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LOXL4Q96JB6 756 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DCBLD2Q96PD2 775 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 BBS2Q9BXC9 721 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 OSBPL1AQ9BXW6 950 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZYG11BQ9C0D3 744 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SDCBP2Q9H190 292 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GKN1Q9NS71 199 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM221A6NGB7 291 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 HACD1B0YJ81 288 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 H0Y3Z8 333 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 M0R296 226 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 YKT6O15498 198 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GPR37L1O60883 481 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ENDOD1O94919 500 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 APBB3O95704 486 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GLP2RO95838 553 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ATF6P18850 670 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CASP14P31944 242 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 HOXD12P35452 270 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 EIF4A3P38919 411 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TSPAN7P41732 249 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CXCR3P49682 368 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 POLR2LP62875 67 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PTP4A2Q12974 167 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ORC1Q13415 861 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PDK1Q15118 436 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SLC14A2Q15849 920 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CLPPQ16740 277 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 USP39Q53GS9 565 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FAM78AQ5JUQ0 283 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 EMC10Q5UCC4 262 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ASTLQ6HA08 431 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DENND1BQ6P3S1 775 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CDKL3Q8IVW4 592 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DEFB106AQ8N104 65 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 OXR1Q8N573 874 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GSDMBQ8TAX9 411 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FAM81AQ8TBF8 368 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CPLX3Q8WVH0 158 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 KRT35Q92764 455 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 N4BP2L2Q92802 583 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FOXJ1Q92949 421 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 POM121Q96HA1 1249 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RPRD1AQ96P16 312 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SH3GL1Q99961 368 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ECT2Q9H8V3 914 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 KCNK12Q9HB15 430 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 IL21Q9HBE4 155 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LIMD1Q9UGP4 676 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NOCTQ9UK39 431 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms