RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RAB14P61106 215 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PLIN5Q00G26 463 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CBLBQ13191 982 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 OTUD3Q5T2D3 398 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ARMC4Q5T2S8 1044 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PARP8Q8N3A8 854 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 VGLL2Q8N8G2 317 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SEPT8Q92599 483 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PIF1Q9H611 641 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 AAASQ9NRG9 546 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CNTNAP4Q9C0A0 1308 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CAPN14A8MX76 684 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PRR5-ARHGAP8B1AHC4 643 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GSTT2P0CG29 244 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GSTT2BP0CG30 244 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 VARSP26640 1264 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ADORA2BP29275 332 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GRIK1P39086 918 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GPC3P51654 580 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ARHGAP8P85298 464 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ADGRE1Q14246 886 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SAPCD2Q86UD0 394 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 KBTBD6Q86V97 674 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 OR6B3Q8NGW1 331 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ADAMTS16Q8TE57 1224 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 DCAF4Q8WV16 495 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 MCRS1Q96EZ8 462 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 VPS33BQ9H267 617 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 MUC13Q9H3R2 512 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RUBCNLQ9H714 662 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GPATCH2LQ9NWQ4 482 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RBAKQ9NYW8 714 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 TOGARAM1Q9Y4F4 1720 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 FAM172BPA6NC97 362 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SPDYE2BA6NHP3 402 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CLDN25C9JDP6 229 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PPEF1O14829 653 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RGS13O14921 159 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 FAM86B2P0C5J1 330 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SPDYE6P0CI01 402 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PDGFRAP16234 1089 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ILF2Q12905 390 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 INSCQ1MX18 579 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ARMCX4Q5H9R4 360 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GALNT18Q6P9A2 607 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CAMK1DQ8IU85 385 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 MMAAQ8IVH4 418 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF669Q96BR6 464 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC17Q96LX7 622 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 NAT9Q9BTE0 207 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 NMUR2Q9GZQ4 415 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SENP6Q9GZR1 1112 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SESN1Q9Y6P5 492 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ANKRD63C9JTQ0 380 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PRR23D1E9PI22 279 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 K7ERI5 159 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ITGAVP06756 1048 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CD48P09326 243 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PRR23D2P0DMB1 279 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CREB1P16220 341 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 IL5RAQ01344 420 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 BST1Q10588 318 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PEX6Q13608 980 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GTF2H3Q13889 308 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PIGHQ14442 188 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 FASTKD5Q7L8L6 764 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 P3H2Q8IVL5 708 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 C12orf56Q8IXR9 622 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SLC15A3Q8IY34 581 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RP9Q8TA86 221 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PDCD6IPQ8WUM4 868 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PANX3Q96QZ0 392 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 WDR41Q9HAD4 459 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PLCH1Q4KWH8 1693 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 NDUFB5O43674 189 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RAD17O75943 681 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SLC5A2P31639 672 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 IL12RB1P42701 662 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PRIM2P49643 509 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MYL6P60660 151 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ABCE1P61221 599 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 GLRA4Q5JXX5 417 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 FAM160B1Q5W0V3 765 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SYCE2Q6PIF2 218 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 HPS6Q86YV9 775 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MBOAT7Q96N66 472 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF347Q96SE7 839 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PSD2Q9BQI7 771 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DHRS4Q9BTZ2 278 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RMND5AQ9H871 391 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TOPORSQ9NS56 1045 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CDH22Q9UJ99 828 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DNPEPQ9ULA0 475 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 WBP11Q9Y2W2 641 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 POLBP06746 335 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CCNA2P20248 432 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms