RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 RNF43Q68DV7 783 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 ABHD15Q6UXT9 468 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 IQCKQ8N0W5 287 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 NMRK1Q9NWW6 199 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SOX11P35716 441 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 CHKAP35790 457 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 AUHQ13825 339 aaKnown RBP16.51■□□□□ 0.23
KDM4B-203ENST00000536461 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
KDM4B-203ENST00000536461 NFIL3Q16649 462 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SPDYE7PQ495Y7 208 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 PLPP4Q5VZY2 271 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 COLGALT1Q8NBJ5 622 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 EPS8L1Q8TE68 723 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 KLHL25Q9H0H3 589 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 OSGEPL1Q9H4B0 414 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 PADI3Q9ULW8 664 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SYNDIG1LA6NDD5 238 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 KPNA3O00505 521 aaPredicted RBP16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SHOX2O60902 331 aaPredicted RBP16.51■□□□□ 0.23
KDM4B-203ENST00000536461 GJB1P08034 283 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 PSEN1P49768 467 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SLC6A3Q01959 620 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 SLC45A4Q5BKX6 768 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 TERB1Q8NA31 727 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 TTPALQ9BTX7 342 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 CLPBQ9H078 707 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 NCKIPSDQ9NZQ3 722 aa16.51■□□□□ 0.23
KDM4B-203ENST00000536461 OR6C75A6NL08 312 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 APOC4-APOC2K7ER74 178 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 TREHO43280 583 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PEX10O60683 326 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 TNFAIP8O95379 198 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 IGSF6O95976 241 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 APOC2P02655 101 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 MPOP05164 745 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 GLUD2P49448 558 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 CDH17Q12864 832 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 C18orf25Q96B23 403 aaPredicted RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 REXO2Q9Y3B8 237 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 STARD13Q9Y3M8 1113 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PSMA4P25789 261 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 NPY2RP49146 381 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 CDK16Q00536 496 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 ITGA9Q13797 1035 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 TRIM60Q495X7 471 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PDPK2PQ6A1A2 396 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PLEKHA7Q6IQ23 1121 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PKN3Q6P5Z2 889 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 MICU2Q8IYU8 434 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 USP1O94782 785 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 LYPLA2O95372 231 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PECAM1P16284 738 aaPredicted RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 ATP6V1C1P21283 382 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 PTPN7P35236 360 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 ADARP55265 1226 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 STRA8Q7Z7C7 330 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 TBC1D10AQ9BXI6 508 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 KCTD10Q9H3F6 313 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 RBPJLQ9UBG7 517 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 DNMT3LQ9UJW3 386 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 WDR47O94967 919 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 C16orf72Q14CZ0 275 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 MIIPQ5JXC2 388 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 CTU1Q7Z7A3 348 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 SPATA20Q8TB22 786 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 C1QTNF7Q9BXJ2 289 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 ARMCX1Q9P291 453 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 FBXO10Q9UK96 956 aa16.5■□□□□ 0.23
KDM4B-203ENST00000536461 EIF3LQ9Y262 564 aaKnown RBP16.5■□□□□ 0.23
KDM4B-203ENST00000536461 KANSL1LA0AUZ9 987 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 ZW10O43264 779 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 SUPT7LO94864 414 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 SMPD1P17405 629 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 OR1D2P34982 312 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
KDM4B-203ENST00000536461 SLC22A9Q8IVM8 553 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 ADAM32Q8TC27 787 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 LNPEPQ9UIQ6 1025 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 NUDT5Q9UKK9 219 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 VANGL2Q9ULK5 521 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 ASTN1O14525 1302 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 HNRNPCL2B2RXH8 293 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
KDM4B-203ENST00000536461 MZF1P28698 734 aaPredicted RBP16.49■□□□□ 0.23
KDM4B-203ENST00000536461 TPP2P29144 1249 aaPredicted RBP16.49■□□□□ 0.23
KDM4B-203ENST00000536461 XRCC4Q13426 336 aa16.49■□□□□ 0.23
KDM4B-203ENST00000536461 SEL1L3Q68CR1 1132 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms