RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 IGSF8Q969P0 613 aa14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 RPRD1AQ96P16 312 aaPredicted RBP14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 NAA15Q9BXJ9 866 aaKnown RBP14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 BTBD1Q9H0C5 482 aa14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 SLCO3A1Q9UIG8 710 aa14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 VANGL2Q9ULK5 521 aa14.75□□□□□ -0.05
RTN3P1-201ENST00000536295 A0A1B0GVM2 712 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 TCAF2A6NFQ2 919 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 F8VZ95 297 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 BCAT2O15382 392 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 RNASEH1O60930 286 aaKnown RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 FSBPO95073 299 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SEMA4FO95754 770 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SRPRAP08240 638 aaKnown RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 TFE3P19532 575 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 MZF1P28698 734 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 MATKP42679 507 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 STK19P49842 368 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SULT1E1P49888 294 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 IRAK1P51617 712 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 ZBTB16Q05516 673 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SEMA3BQ13214 749 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 AUHQ13825 339 aaKnown RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 KRT31Q15323 416 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 C9orf64Q5T6V5 341 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 TTC39BQ5VTQ0 682 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 OTUD1Q5VV17 481 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 NOP9Q86U38 636 aaKnown RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 ERICH1Q86X53 443 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 ZDHHC17Q8IUH5 632 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 ZNF397Q8NF99 534 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 C18orf8Q96DM3 657 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 STK33Q9BYT3 514 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SIK2Q9H0K1 926 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 RSPH9Q9H1X1 276 aaPredicted RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 PABPC3Q9H361 631 aaKnown RBP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 NCKAP1Q9Y2A7 1128 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 HS3ST4Q9Y661 456 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 SLCO1B1Q9Y6L6 691 aa14.74□□□□□ -0.05
RTN3P1-201ENST00000536295 EDDM13A0A1B0GTR0 161 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 SPAARA0A1B0GVQ0 90 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 FAM47DPA6NHR8 397 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 GOLGA8SH3BPF8 625 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 MID1O15344 667 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 PAGE1O75459 146 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 GFPT2O94808 682 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 TPM2P07951 284 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 MMEP08473 750 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 SPINK2P20155 84 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 CDH5P33151 784 aaPredicted RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 CDKAL1Q5VV42 579 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 CXorf57Q6NSI4 855 aaKnown RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 SASS6Q6UVJ0 657 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 C14orf80Q86SX3 495 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 PIP4P1Q86T03 277 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 MMAAQ8IVH4 418 aaKnown RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 KDM1BQ8NB78 822 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 CPA5Q8WXQ8 436 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 NPY6RQ99463 290 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 TKTL2Q9H0I9 626 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 PCED1AQ9H1Q7 454 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 GANQ9H2C0 597 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 FAM207AQ9NSI2 230 aaPredicted RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 PIGVQ9NUD9 493 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 DNAAF2Q9NVR5 837 aaKnown RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 FANCLQ9NW38 375 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 FBXL12Q9NXK8 326 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 STAP1Q9ULZ2 295 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 SNX10Q9Y5X0 201 aa14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 ASCC3Q8N3C0 2202 aaKnown RBP14.73□□□□□ -0.05
RTN3P1-201ENST00000536295 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 A0A1W2PP55 124 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 RNASEH2AO75792 299 aaKnown RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 ADCY5O95622 1261 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 TOP3BO95985 862 aaKnown RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 CD59P13987 128 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 VAV1P15498 845 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 NNMTP40261 264 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 PSMD8P48556 350 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 CSNK1EP49674 416 aaKnown RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 POLR2FP61218 127 aaKnown RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 SIM1P81133 766 aaPredicted RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 SHC2P98077 582 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 DEUP1Q05D60 604 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 ZNF177Q13360 481 aaPredicted RBP14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 CST6Q15828 149 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 FKBP15Q5T1M5 1219 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 NAA35Q5VZE5 725 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 SND1Q7KZF4 910 aaKnown RBP eCLIP14.72□□□□□ -0.059e-12■■■■■ 47.2
RTN3P1-201ENST00000536295 XYLT1Q86Y38 959 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 STK40Q8N2I9 435 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 OR52K2Q8NGK3 314 aa14.72□□□□□ -0.05
RTN3P1-201ENST00000536295 EPS8L1Q8TE68 723 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms