RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GPRASP2Q96D09 838 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 RSPRY1Q96DX4 576 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 HIC2Q96JB3 615 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 ZNF512Q96ME7 567 aaPredicted RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 TTC14Q96N46 770 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 KCNJ15Q99712 375 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 P2RY13Q9BPV8 354 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 BTBD2Q9BX70 525 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 GPR88Q9GZN0 384 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 FZD8Q9H461 694 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 PRDM13Q9H4Q3 707 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TRPV4Q9HBA0 871 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 UBN1Q9NPG3 1134 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 METTL5Q9NRN9 209 aaKnown RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 TM7SF3Q9NS93 570 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 ADAM28Q9UKQ2 775 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 EXOC6BQ9Y2D4 811 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 NOP58Q9Y2X3 529 aaKnown RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 SF3B1O75533 1304 aaKnown RBP eCLIP4.34□□□□□ -1.71
YBX3-205ENST00000536107 CNTNAP2Q9UHC6 1331 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 COL1A2P08123 1366 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 KIAA1217Q5T5P2 1943 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 MYH4Q9Y623 1939 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 AHCTF1Q8WYP5 2266 aa4.34□□□□□ -1.72
YBX3-205ENST00000536107 NF1P21359 2839 aa4.34□□□□□ -1.72
YBX3-205ENST00000536107 PLXNB3Q9ULL4 1909 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 NID2Q14112 1375 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 VPS37CA5D8V6 355 aaPredicted RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 DDX39AO00148 427 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 TRDMT1O14717 391 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 ZBTB5O15062 677 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 FLRT2O43155 660 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 GJB3O75712 270 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 LUC7L3O95232 432 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 CER1O95813 267 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 SFTPCP11686 197 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 PDIA4P13667 645 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 KIF5BP33176 963 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 MLH1P40692 756 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 P2RY2P41231 377 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 CCR2P41597 374 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 NOVP48745 357 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 GPC3P51654 580 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 GHRHRQ02643 423 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ZNF33AQ06730 810 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 GRIK2Q13002 908 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 RAB33AQ14088 237 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ASPRV1Q53RT3 343 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 SYCP2LQ5T4T6 812 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 BTBD8Q5XKL5 378 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 SLC36A4Q6YBV0 504 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ERICH1Q86X53 443 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ARID3BQ8IVW6 561 aaPredicted RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 DHX40Q8IX18 779 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 CCDC33Q8N5R6 958 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 FAM169BQ8N8A8 192 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 C9orf106Q8NAJ2 232 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 BEND2Q8NDZ0 799 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 CCDC26Q8TAB7 109 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 SPATA20Q8TB22 786 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 HMGB4Q8WW32 186 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 FAM124BQ9H5Z6 455 aaPredicted RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 GAREM1Q9H706 876 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 KAT14Q9H8E8 782 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 IL21RQ9HBE5 538 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 CYP4F11Q9HBI6 524 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 FBRSL1Q9HCM7 1045 aaKnown RBP4.33□□□□□ -1.72
YBX3-205ENST00000536107 ZNF302Q9NR11 478 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ASAH2Q9NR71 780 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 STARD5Q9NSY2 213 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 ECHDC1Q9NTX5 307 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 TCEAL9Q9UHQ7 104 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.33□□□□□ -1.72
YBX3-205ENST00000536107 CDY1Q9Y6F8 540 aa4.33□□□□□ -1.72
YBX3-205ENST00000536107 SPAG17Q6Q759 2223 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 ZMYM6O95789 1325 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CLEC18AA5D8T8 446 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 ARL5CA6NH57 179 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 RNF113AO15541 343 aaKnown RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 PTPN1P18031 435 aaKnown RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 ATP5JP18859 108 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 MATKP42679 507 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CD83Q01151 205 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 DDX10Q13206 875 aaKnown RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 RUNX3Q13761 415 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 HSP90AA2PQ14568 343 aaPredicted RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 ELAVL1Q15717 326 aaKnown RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 HSP90AB4PQ58FF6 505 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 HES3Q5TGS1 186 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 VPS53Q5VIR6 699 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 KANK2Q63ZY3 851 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 SWSAP1Q6NVH7 229 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 MIS18BP1Q6P0N0 1132 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CC2D1AQ6P1N0 951 aaPredicted RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 FBXO42Q6P3S6 717 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 IL27RAQ6UWB1 636 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CLEC18BQ6UXF7 455 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms