RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ZSCAN5DPP0CG00 497 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 SGCGQ13326 291 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 RAPSNQ13702 412 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 RASA2Q15283 850 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 REPS2Q8NFH8 660 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ZDHHC6Q9H6R6 413 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 PCDHB5Q9Y5E4 795 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 SMAPO00193 183 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 PGBD2Q6P3X8 592 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ZNF621Q6ZSS3 439 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 WHRNQ9P202 907 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 IPPQ9Y573 584 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 TSPAN8P19075 237 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 MARC1Q5VT66 337 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 IRAK1BP1Q5VVH5 260 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 BNC2Q6ZN30 1099 aaPredicted RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 FAM20CQ8IXL6 584 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 GLIS3Q8NEA6 775 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 GRIN3AQ8TCU5 1115 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 FAM25EA8MYX2 175 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 RAG1P15918 1043 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 LSM3P62310 102 aaKnown RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 DGCR6Q14129 220 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ACAP1Q15027 740 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 FAM45BPQ6NSW5 357 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 GLT6D1Q7Z4J2 308 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 PARGQ86W56 976 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 CD302Q8IX05 232 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 RTL3Q8N8U3 475 aaKnown RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 TNKS2Q9H2K2 1166 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 BARX2Q9UMQ3 279 aaPredicted RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 AP3D1O14617 1153 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 SNX30Q5VWJ9 437 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ZNF606Q8WXB4 792 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 SOHLH2Q9NX45 425 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 TIMM44O43615 452 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 F9P00740 461 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 FAM153BP0C7A2 387 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 VAV1P15498 845 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
SPG11-203ENST00000535302 SLC1A6P48664 564 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 FAM153CQ494X1 144 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 KDM7AQ6ZMT4 941 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 DEFB107AQ8IZN7 70 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 LPPQ93052 612 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 SLC4A5Q9BY07 1137 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 DCLK3Q9C098 648 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ARMC7Q9H6L4 198 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 DSEQ9UL01 958 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 VPS9D1Q9Y2B5 631 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 SEC22BO75396 215 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 VAPBO95292 243 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 STX5Q13190 355 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ITGA9Q13797 1035 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 KCNMB4Q86W47 210 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 HDAC7Q8WUI4 952 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 CCDC167Q9P0B6 97 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 ACOT9Q9Y305 439 aa12.87□□□□□ -0.35
SPG11-203ENST00000535302 HMGCRP04035 888 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 NQO1P15559 274 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 PTSQ03393 145 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 SDHAF4Q5VUM1 108 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 DNAJC1Q96KC8 554 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 TKTL2Q9H0I9 626 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 COG5Q9UP83 839 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 NAALADL1Q9UQQ1 740 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 FGRP09769 529 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 PDHA2P29803 388 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 RPL21P46778 160 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 CEBPGP53567 150 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 MRPS35P82673 323 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 NRF1Q16656 503 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 NMRK1Q9NWW6 199 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 PACSIN3Q9UKS6 424 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 RAMP2O60895 175 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 BANF1O75531 89 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms