RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	ERVK-9	P63128	1117 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	VAT1	Q99536	393 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	GLIS2	Q9BZE0	524 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	PHACTR1	Q9C0D0	580 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	NINJ2	Q9NZG7	142 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	FAM25A	B3EWG3	89 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	FAM25C	B3EWG5	89 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	FAM25G	B3EWG6	89 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	ATP6V1C1	P21283	382 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	ACAP1	Q15027	740 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	DDR2	Q16832	855 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	CASP12	Q6UXS9	341 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	CACUL1	Q86Y37	369 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	APLF	Q8IW19	511 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	FAM126B	Q8IXS8	530 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	EID3	Q8N140	333 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	TPD52L3	Q96J77	140 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	PDGFD	Q9GZP0	370 aa	Predicted RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	VPS4B	O75351	444 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	HMGCR	P04035	888 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	POLR2L	P62875	67 aa	Known RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	WDR36	Q8NI36	951 aa	Known RBP	19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	CSGALNACT1	Q8TDX6	532 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	USP7	Q93009	1102 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	RNFT2	Q96EX2	444 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	CDHR5	Q9HBB8	845 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	EPHX4	Q8IUS5	362 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	DNPEP	Q9ULA0	475 aa		19.92	■□□□□ 0.78
FGFR1-238	ENST00000532791	POLR2E	P19388	210 aa	Known RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	LENG9	Q96B70	501 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	CDCA5	Q96FF9	252 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	BDH2	Q9BUT1	245 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ULBP1	Q9BZM6	244 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	POMK	Q9H5K3	350 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZNF839	A8K0R7	811 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	CES2	O00748	559 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	TRIM24	O15164	1050 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	CLPTM1	O96005	669 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	C4BPB	P20851	252 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	PSMB9	P28065	219 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	NAB1	Q13506	487 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	SETMAR	Q53H47	684 aa	Predicted RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	EARS2	Q5JPH6	523 aa	Known RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ABCC13	Q9NSE7	274 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	INPP4B	O15327	924 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZBTB14	O43829	449 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	PEX1	O43933	1283 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	IQSEC1	Q6DN90	963 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMPRSS6	Q8IU80	811 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	OR8H2	Q8N162	312 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	POLR1E	Q9GZS1	481 aa	Known RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	HMX1	Q9NP08	348 aa	Predicted RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ADPRHL2	Q9NX46	363 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZNF112	Q9UJU3	913 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	MRAS	O14807	208 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	LGALS2	P05162	132 aa		19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	H2AFX	P16104	143 aa	Predicted RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZNF135	P52742	658 aa	Predicted RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	SNRNP27	Q8WVK2	155 aa	Known RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	OXNAD1	Q96HP4	312 aa	Predicted RBP	19.91	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZW10	O43264	779 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	ADAM2	Q99965	735 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	PRKAG3	Q9UGI9	489 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	KLHL3	Q9UH77	587 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	ANKRD63	C9JTQ0	380 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	APOC4-APOC2	K7ER74	178 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	DDX3X	O00571	662 aa	Known RBP eCLIP	19.9	■□□□□ 0.78	6e-11	■■■■■ 29.3
FGFR1-238	ENST00000532791	RECQL4	O94761	1208 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	APOC2	P02655	101 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	PIK3CG	P48736	1102 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	CLK2	P49760	499 aa	Known RBP	19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	CYP2A13	Q16696	494 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMEM132C	Q8N3T6	1108 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	CAMKK1	Q8N5S9	505 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	DDX4	Q9NQI0	724 aa	Known RBP	19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	FRMPD1	Q5SYB0	1578 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	MEI4	A8MW99	385 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791		A8MX80	341 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	FCHO1	O14526	889 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SCARA3	Q6AZY7	606 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	MACC1	Q6ZN28	852 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	C19orf18	Q8NEA5	215 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SKA1	Q96BD8	255 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	AHCYL2	Q96HN2	611 aa	Known RBP	19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMEM51	Q9NW97	253 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	RGS14	O43566	566 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	ZNF862	O60290	1169 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SERPINA4	P29622	427 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	HPCAL1	P37235	193 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	RXRG	P48443	463 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	OTUD3	Q5T2D3	398 aa	Predicted RBP	19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	WDR59	Q6PJI9	974 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	TMC3	Q7Z5M5	1100 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	GPC2	Q8N158	579 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SPATA20	Q8TB22	786 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	C19orf60	Q96EN9	201 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SENP8	Q96LD8	212 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	SIKE1	Q9BRV8	207 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	IGFLR1	Q9H665	355 aa		19.9	■□□□□ 0.78
FGFR1-238	ENST00000532791	LIMD1	Q9UGP4	676 aa		19.9	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms