RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GP5P40197 560 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 PRKAA2P54646 552 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 NR6A1Q15406 480 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 MON2Q7Z3U7 1717 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 TRAV19A0A0A6YYK7 116 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CCT8L1PA6NM43 557 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 FGF10O15520 208 aaPredicted RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 CYP1A1P04798 512 aaPredicted RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 NT5DC1Q5TFE4 455 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 USP45Q70EL2 814 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 GRIN3AQ8TCU5 1115 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 MAGED4Q96JG8 741 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 PPP1R10Q96QC0 940 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 NMRAL1Q9HBL8 299 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 FAM50BQ9Y247 325 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 PDPK2PQ6A1A2 396 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 MFSD7Q6UXD7 560 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 PLPPR4Q7Z2D5 763 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 STK40Q8N2I9 435 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 GALNT4Q8N4A0 578 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 POLR1EQ9GZS1 481 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 NXF3Q9H4D5 531 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 ASAH2Q9NR71 780 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 PHTF1Q9UMS5 762 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 TNFSF13BQ9Y275 285 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 GNRH1P01148 92 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 ADH1AP07327 375 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CRABP2P29373 138 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CHKAP35790 457 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 MRPL28Q13084 256 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 DDR2Q16832 855 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 ZC3H12AQ5D1E8 599 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 ATAD3BQ5T9A4 648 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 GLT6D1Q7Z4J2 308 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CDK20Q8IZL9 346 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 ETNPPLQ8TBG4 499 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 RGS18Q9NS28 235 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 H3BMM5 538 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 TLL1O43897 1013 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 USP12O75317 370 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CPSF4O95639 269 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 PLOD1Q02809 727 aaPredicted RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 SETMARQ53H47 684 aaPredicted RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 HECTD3Q5T447 861 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 NETO2Q8NC67 525 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 USE1Q9NZ43 259 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 KATNA1O75449 491 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 USP1O94782 785 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CSH1P0DML2 217 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CSH2P0DML3 217 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 CCND1P24385 295 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 BOP1Q14137 746 aaKnown RBP15.07■□□□□ 0
PCDHA9-202ENST00000532602 TRIM60Q495X7 471 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 ACOX2Q99424 681 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 YIPF3Q9GZM5 350 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 GOLGA2P5Q9HBQ8 144 aa15.07■□□□□ 0
PCDHA9-202ENST00000532602 TM9SF1O15321 606 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SPATA31C1P0DKV0 1188 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 PGAM1P18669 254 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 DEFA1P59665 94 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 DEFA3P59666 94 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 HSDL1Q3SXM5 330 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 ZSCAN32Q9NX65 697 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 STARD13Q9Y3M8 1113 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 PCDHA3Q9Y5H8 950 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 CCNT2O60583 730 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 ETS1P14921 441 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 CYP2A13Q16696 494 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 GRTP1Q5TC63 336 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 IYDQ6PHW0 289 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 MAGEB18Q96M61 343 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 CERS4Q9HA82 394 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 TRPC4Q9UBN4 977 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SLIT3O75094 1523 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 RPS7P62081 194 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 GTF2BQ00403 316 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 MMRN1Q13201 1228 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SPANXN3Q5MJ09 141 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 PLPP4Q5VZY2 271 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SEMA4DQ92854 862 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 FAM120BQ96EK7 910 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 TBL1YQ9BQ87 522 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 DNPEPQ9ULA0 475 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SKIV2L2P42285 1042 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 XRCC4Q13426 336 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 USP39Q53GS9 565 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 ZNF697Q5TEC3 545 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 WDR59Q6PJI9 974 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 SH3BP5LQ7L8J4 393 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 METTL3Q86U44 580 aaKnown RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 FBXO39Q8N4B4 442 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 VPS33AQ96AX1 596 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 TFE3P19532 575 aaPredicted RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 NOS2P35228 1153 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 MMP13P45452 471 aa15.06■□□□□ 0
PCDHA9-202ENST00000532602 CRYBB1P53674 252 aaPredicted RBP15.06■□□□□ 0
PCDHA9-202ENST00000532602 KCNA10Q16322 511 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms