RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 BTN2A3PQ96KV6 586 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 CPXM1Q96SM3 734 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 MLPHQ9BV36 600 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 COPS7BQ9H9Q2 264 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 AKAP7Q9P0M2 348 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 TRIM49D1C9J1S8 452 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 GUCA1CO95843 209 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 ADSSP30520 456 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PCK1P35558 622 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 RAD23BP54727 409 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 IRF5Q13568 498 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 ARL8AQ96BM9 186 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PCYT2Q99447 389 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SEMA3CQ99985 751 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SHCBP1LQ9BZQ2 653 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 TMPRSS4Q9NRS4 437 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SAGE1Q9NXZ1 904 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 MARCOQ9UEW3 520 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 YIPF1Q9Y548 306 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 NUP98P52948 1817 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 INPPL1O15357 1258 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 CDH16O75309 829 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 DDX5P17844 614 aaKnown RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 WARSP23381 471 aaKnown RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 MGAT1P26572 445 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 TPGS2Q68CL5 300 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 JOSD2Q8TAC2 188 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 KLHL5Q96PQ7 755 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 TRIM45Q9H8W5 580 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 RGS18Q9NS28 235 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SPASTQ9UBP0 616 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 DNAJC16Q9Y2G8 782 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 DYRK1BQ9Y463 629 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 WDR27A2RRH5 827 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 TARSL2A2RTX5 802 aaKnown RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 ATP8B1O43520 1251 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 MGEA5O60502 916 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PIRTP0C851 137 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 CCNB1P14635 433 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 STMN1P16949 149 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 ZNF7P17097 686 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PRKCQQ04759 706 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 WASHC5Q12768 1159 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PHKG1Q16816 387 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PTPN20Q4JDL3 420 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PMF1Q6P1K2 205 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 GRASPQ7Z6J2 395 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 DAW1Q8N136 415 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SCAMP5Q8TAC9 235 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 SPDL1Q96EA4 605 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 DNPEPQ9ULA0 475 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 RUVBL2Q9Y230 463 aaKnown RBP8.13□□□□□ -1.11
CTNND1-230ENST00000532245 PCDHA3Q9Y5H8 950 aa8.13□□□□□ -1.11
CTNND1-230ENST00000532245 VAPBO95292 243 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 OR56A5P0C7T3 313 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ERCC2P18074 760 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 KCNA5P22460 613 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CBX2Q14781 532 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SLC25A52Q3SY17 297 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 AGAP9Q5VTM2 703 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 REXO1L1PQ8IX06 675 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 HIPK4Q8NE63 616 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 LZICQ8WZA0 190 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TIFAQ96CG3 184 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 NTPCRQ9BSD7 190 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ARHGEF4Q9NR80 690 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 GIMAP4Q9NUV9 329 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 AGO1Q9UL18 857 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 ADGRA3Q8IWK6 1321 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PPEF2O14830 753 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 AMD1P17707 334 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 HTR1BP28222 390 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SULT2A1Q06520 285 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.113e-8■■■■■ 29.5
CTNND1-230ENST00000532245 C2orf27AQ580R0 203 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 C6orf10Q5SRN2 563 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 LINGO4Q6UY18 593 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CHRDL2Q6WN34 429 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 CCNJLQ8IV13 435 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SLC4A11Q8NBS3 891 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 OR14C36Q8NHC7 312 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 TACO1Q9BSH4 297 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 HACD1B0YJ81 288 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 STAU1O95793 577 aaKnown RBP8.12□□□□□ -1.11
CTNND1-230ENST00000532245 KRT4P19013 534 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 RFX3P48380 749 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 GYS2P54840 703 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 BRMS1LQ5PSV4 323 aa8.12□□□□□ -1.11
CTNND1-230ENST00000532245 AADACL2Q6P093 401 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms