RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 IGLV3-19P01714 112 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 ZNF18P17022 549 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 ENGP17813 658 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 PTMSP20962 102 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 COPAP53621 1224 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 KRT83P78385 493 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 TYRO3Q06418 890 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 AUHQ13825 339 aaKnown RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 PTPRNQ16849 979 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 HNRNPA1L2Q32P51 320 aaKnown RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 NAA35Q5VZE5 725 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 NOP9Q86U38 636 aaKnown RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 FAM124AQ86V42 546 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 CPA5Q8WXQ8 436 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 SNX19Q92543 992 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 OMDQ99983 421 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 TKTL2Q9H0I9 626 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 TMEM74BQ9NUR3 256 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 SEPT11Q9NVA2 429 aaKnown RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 XPO7Q9UIA9 1087 aaKnown RBP12.97□□□□□ -0.33
C11orf54-210ENST00000531516 VPS28Q9UK41 221 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 VANGL2Q9ULK5 521 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
C11orf54-210ENST00000531516 METTL12A8MUP2 240 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 ARHGAP33O14559 1287 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 PAGE1O75459 146 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 MMEP08473 750 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 PDGFRAP16234 1089 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 CXCR3P49682 368 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
C11orf54-210ENST00000531516 CDH4P55283 916 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
C11orf54-210ENST00000531516 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 TEAD4Q15561 434 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 FBXL22Q6P050 247 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 IL27RAQ6UWB1 636 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 USP30Q70CQ3 517 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 ARCQ7LC44 396 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 XYLT1Q86Y38 959 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 ZNF366Q8N895 744 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 WFDC5Q8TCV5 224 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 SKA1Q96BD8 255 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 PGAP3Q96FM1 320 aaPredicted RBP12.96□□□□□ -0.33
C11orf54-210ENST00000531516 NPY6RQ99463 290 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 MUC3BQ9H195 1237 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 GANQ9H2C0 597 aa12.96□□□□□ -0.33
C11orf54-210ENST00000531516 TPX2Q9ULW0 747 aaKnown RBP12.96□□□□□ -0.33
C11orf54-210ENST00000531516 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 LRRC10BA6NIK2 292 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 LRRC72A6NJI9 287 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 SEMA4FO95754 770 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ADH1BP00325 375 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 CALB1P05937 261 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ADRB1P08588 477 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 CSRP1P21291 193 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 SDC4P31431 198 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 RPS14P62263 151 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 NOMO3P69849 1222 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ACCSLQ4AC99 568 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 FSCBQ5H9T9 825 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 C1orf74Q96LT6 269 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 PRMT1Q99873 361 aaKnown RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 C2orf49Q9BVC5 232 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 RSPH9Q9H1X1 276 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-210ENST00000531516 FBXL12Q9NXK8 326 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 ARHGEF38Q9NXL2 777 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 CEP250Q9BV73 2442 aa12.95□□□□□ -0.34
C11orf54-210ENST00000531516 C1QTNF3-AMACRE9PGA6 284 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 SIN3BO75182 1162 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 RNASEH2AO75792 299 aaKnown RBP12.94□□□□□ -0.34
C11orf54-210ENST00000531516 KCNK5O95279 499 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 RHOCP08134 193 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 CEACAM1P13688 526 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 FERP16591 822 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 MMP8P22894 467 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 AFF3P51826 1226 aaKnown RBP12.94□□□□□ -0.34
C11orf54-210ENST00000531516 PLK1P53350 603 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 JAM2P57087 298 aa12.94□□□□□ -0.34
C11orf54-210ENST00000531516 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms