RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	C7	P10643	843 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	PDGFRA	P16234	1089 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	SDHB	P21912	280 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ITPKA	P23677	461 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	CD6	P30203	668 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	RDX	P35241	583 aa	Known RBP	12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ARTN	Q5T4W7	220 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	DGLUCY	Q7Z3D6	616 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	LUZP1	Q86V48	1076 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	SLC41A1	Q8IVJ1	513 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF683	Q8IZ20	524 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	EMC1	Q8N766	993 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	OR52K2	Q8NGK3	314 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	PRCC	Q92733	491 aa	Predicted RBP	12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	SYT11	Q9BT88	431 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	SIK2	Q9H0K1	926 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	MTG2	Q9H4K7	406 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	WDCP	Q9H6R7	721 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	CBX8	Q9HC52	389 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ITM2C	Q9NQX7	267 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	TMEM74B	Q9NUR3	256 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ATXN2	Q99700	1313 aa	Known RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362		A0A1W2PQC6	194 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	LNP1	A1A4G5	178 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	MOCS3	O95396	460 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	MZF1	P28698	734 aa	Predicted RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	NSF	P46459	744 aa	Known RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	NUMB	P49757	651 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	TPMT	P51580	245 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	LIMK1	P53667	647 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	GSC	P56915	257 aa	Predicted RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	ECT2L	Q008S8	904 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF33A	Q06730	810 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	C5orf22	Q49AR2	442 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	RAB6C	Q53S08	254 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	MON1B	Q7L1V2	547 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	IRF2BP2	Q7Z5L9	587 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	FAM131B	Q86XD5	332 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	PHF13	Q86YI8	300 aa	Predicted RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	SYT12	Q8IV01	421 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	KDM1B	Q8NB78	822 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	JOSD2	Q8TAC2	188 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	ALG14	Q96F25	216 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	TOE1	Q96GM8	510 aa	Known RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	HSPA12B	Q96MM6	686 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	AGPAT1	Q99943	283 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	RTKN	Q9BST9	563 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	EDEM2	Q9BV94	578 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	RAB6C	Q9H0N0	254 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	FBRS	Q9HAH7	460 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	SEPT11	Q9NVA2	429 aa	Known RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	WSB2	Q9NYS7	404 aa	Predicted RBP	12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	ADAM22	Q9P0K1	906 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	PILRB	Q9UKJ0	227 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	MYO6	Q9UM54	1294 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	ERVW-1	Q9UQF0	538 aa		12.12	□□□□□ -0.47
PSMC3-205	ENST00000528362	TCRBV5S1A1T	A0A578	114 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	C2CD4B	A6NLJ0	364 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	TTC34	A8MYJ7	566 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	KHNYN	O15037	678 aa	Known RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	NDUFS2	O75306	463 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	CLDN11	O75508	207 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	CNTN5	O94779	1100 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ENDOD1	O94919	500 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	SRPRA	P08240	638 aa	Known RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ACADM	P11310	421 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	FER	P16591	822 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	HOXD12	P35452	270 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	STK19	P49842	368 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	PLK1	P53350	603 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	CDH4	P55283	916 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ST8SIA6	P61647	398 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	RPS14	P62263	151 aa	Known RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ATP11A	P98196	1134 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	SLC12A1	Q13621	1099 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ARID5B	Q14865	1188 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	CCDC14	Q49A88	953 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	FILIP1L	Q4L180	1135 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ALF	Q53S48	1182 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	SH3PXD2A	Q5TCZ1	1133 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	STPG1	Q5TH74	334 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	E4F1	Q66K89	784 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	RXFP2	Q8WXD0	754 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	RPL10L	Q96L21	214 aa	Known RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	C1orf74	Q96LT6	269 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	TTYH3	Q9C0H2	523 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	TMEM51	Q9NW97	253 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	SUN2	Q9UH99	717 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	EVL	Q9UI08	416 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	SLCO3A1	Q9UIG8	710 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	TBC1D30	Q9Y2I9	924 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	PAXBP1	Q9Y5B6	917 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	OR51B4	Q9Y5P0	310 aa		12.11	□□□□□ -0.47
PSMC3-205	ENST00000528362	ITIH6	Q6UXX5	1313 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms