RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 LMLNQ96KR4 655 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 NPY6RQ99463 290 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 BPIFA3Q9BQP9 254 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 EDEM2Q9BV94 578 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 ZDHHC5Q9C0B5 715 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 MKRN2Q9H000 416 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 NUCKS1Q9H1E3 243 aaKnown RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 WSB2Q9NYS7 404 aaPredicted RBP9.92□□□□□ -0.82
CHD7-208ENST00000528280 ABCA7Q8IZY2 2146 aa9.92□□□□□ -0.82
CHD7-208ENST00000528280 SDK1Q7Z5N4 2213 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 A0A1B0GVM2 712 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 TCAF2A6NFQ2 919 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 LGALS16A8MUM7 142 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 METTL12A8MUP2 240 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 CLDN11O75508 207 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 GRAP2O75791 330 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 GFPT2O94808 682 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 PTMSP20962 102 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 ITPKAP23677 461 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 PRKCHP24723 683 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 CSKP41240 450 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 CXCR3P49682 368 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 COPAP53621 1224 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 DEUP1Q05D60 604 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 AUHQ13825 339 aaKnown RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 PTPRNQ16849 979 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 TTC31Q49AM3 519 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 C5orf22Q49AR2 442 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 PTPN20Q4JDL3 420 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 USP30Q70CQ3 517 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 EPS8L1Q8TE68 723 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 CYB5D2Q8WUJ1 264 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 TOE1Q96GM8 510 aaKnown RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 RPRD1AQ96P16 312 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 HAPLN3Q96S86 360 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 PRMT1Q99873 361 aaKnown RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 GANQ9H2C0 597 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 SGK2Q9HBY8 427 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 PRSS16Q9NQE7 514 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 FAM207AQ9NSI2 230 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 AJAP1Q9UKB5 411 aaPredicted RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 TPX2Q9ULW0 747 aaKnown RBP9.91□□□□□ -0.82
CHD7-208ENST00000528280 ERVW-1Q9UQF0 538 aa9.91□□□□□ -0.82
CHD7-208ENST00000528280 ADAMTS20P59510 1910 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 PLXND1Q9Y4D7 1925 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 SYNJ2BP-COX16A0A087WUM0 186 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 EDDM13A0A1B0GTR0 161 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 C4orf47A7E2U8 309 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 C1QTNF9BB2RNN3 333 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 CYP1A1P04798 512 aaPredicted RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 CFIP05156 583 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 MMEP08473 750 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 C1QTNF9P0C862 333 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 ZNF18P17022 549 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 DESP17661 470 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 SGSHP51688 502 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 CDH4P55283 916 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 JAM2P57087 298 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 KRT83P78385 493 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 TYRO3Q06418 890 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 SLC14A1Q13336 389 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 HNRNPDQ14103 355 aaKnown RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 HNRNPA1L2Q32P51 320 aaKnown RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 PLEKHG6Q3KR16 790 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 ARL13BQ3SXY8 428 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 PITRM1Q5JRX3 1037 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 TAF3Q5VWG9 929 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 FBXL22Q6P050 247 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 UNQ6494/PRO21346Q6UXR6 183 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 ARMCX6Q7L4S7 300 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 DSG4Q86SJ6 1040 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 NOP9Q86U38 636 aaKnown RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 XYLT1Q86Y38 959 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 CCAR2Q8N163 923 aaKnown RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 HDDC3Q8N4P3 179 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 CPA5Q8WXQ8 436 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 HSPA12BQ96MM6 686 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 PRICKLE1Q96MT3 831 aaPredicted RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 GPR174Q9BXC1 333 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 BTBD1Q9H0C5 482 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 TKTL2Q9H0I9 626 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 RSPH9Q9H1X1 276 aaPredicted RBP9.9□□□□□ -0.82
CHD7-208ENST00000528280 SMOC1Q9H4F8 434 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 SLC32A1Q9H598 525 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 NLRC4Q9NPP4 1024 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 TMEM74BQ9NUR3 256 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 COX16Q9P0S2 106 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 MYO6Q9UM54 1294 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 SIK3Q9Y2K2 1263 aa9.9□□□□□ -0.82
CHD7-208ENST00000528280 A0A1B0GTW7 788 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms