RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CFAP54Q96N23 3096 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CLDN11O75508 207 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ADCY5O95622 1261 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 SERPINC1P01008 464 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 HLA-EP13747 358 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 HOXD12P35452 270 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 LIMK1P53667 647 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CDH4P55283 916 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ECT2LQ008S8 904 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 RPL6Q02878 288 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 SULT2A1Q06520 285 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 FIGNQ5HY92 759 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 TRNP1Q6NT89 227 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 KIAA1324Q6UXG2 1013 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CYP2U1Q7Z449 544 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 TMEFF1Q8IYR6 380 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 MYO19Q96H55 970 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 MRGPRX3Q96LB0 322 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CFAP57Q96MR6 1250 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 C11orf70Q9BRQ4 267 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLC6A17Q9H1V8 727 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 PRSS16Q9NQE7 514 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 METTL5Q9NRN9 209 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 VANGL2Q9ULK5 521 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ERVW-1Q9UQF0 538 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 TBC1D30Q9Y2I9 924 aa12.49□□□□□ -0.41
TRAPPC4-209ENST00000528230 ITIH6Q6UXX5 1313 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 SIGLEC16A6NMB1 481 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 DRGXA6NNA5 263 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 SLC30A4O14863 429 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 NDUFS2O75306 463 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ACADMP11310 421 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 KRT3P12035 628 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 CD6P30203 668 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 SDC4P31431 198 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 PTGER3P43115 390 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 PTPN9P43378 593 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 TPMTP51580 245 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF33AQ06730 810 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 HNRNPA1L2Q32P51 320 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 PEAR1Q5VY43 1037 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 LYSMD4Q5XG99 296 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ACAD10Q6JQN1 1059 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 LRRC31Q6UY01 552 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 SYT12Q8IV01 421 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZNF683Q8IZ20 524 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 APCDD1Q8J025 514 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 FOXJ1Q92949 421 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 EVLQ9UI08 416 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-209ENST00000528230 GON4LQ3T8J9 2241 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 IGLV3-10A0A075B6K4 115 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 NNMTP40261 264 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 PRKCIP41743 596 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 FANCCQ00597 558 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 FOXK2Q01167 660 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SF3A2Q15428 464 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 CCDC6Q16204 474 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 ARL13BQ3SXY8 428 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 CCDC14Q49A88 953 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-209ENST00000528230 MON1BQ7L1V2 547 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms