RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZBTB16Q05516 673 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 MMS22LQ6ZRQ5 1243 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 BNIPLQ7Z465 357 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 MRGPRX3Q96LB0 322 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 RPRD1AQ96P16 312 aaPredicted RBP34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 WDCPQ9H6R7 721 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 PRSS16Q9NQE7 514 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 ACADMP11310 421 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 TFE3P19532 575 aaPredicted RBP34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 ITPKAP23677 461 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 PLK1P53350 603 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 DEUP1Q05D60 604 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 KLHL40Q2TBA0 621 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 C2CD6Q53TS8 623 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 SLC41A1Q8IVJ1 513 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 CEP76Q8TAP6 659 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 TOE1Q96GM8 510 aaKnown RBP34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 TBCBQ99426 244 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 FUCA2Q9BTY2 467 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 TMEM74BQ9NUR3 256 aa34.09■■■■□ 3.05
SSSCA1-205ENST00000527920 GOLGA8SH3BPF8 625 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 UNGP13051 313 aaPredicted RBP34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 ZNF165P49910 485 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 HNRNPA1L2Q32P51 320 aaKnown RBP34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 IL31Q6EBC2 164 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 ZNF366Q8N895 744 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 CADM4Q8NFZ8 388 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 IGSF8Q969P0 613 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 HSPA12BQ96MM6 686 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 PPP1R9BQ96SB3 815 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 TKTL2Q9H0I9 626 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 ERVW-1Q9UQF0 538 aa34.08■■■■□ 3.05
SSSCA1-205ENST00000527920 ITIH6Q6UXX5 1313 aa34.07■■■■□ 3.05
SSSCA1-205ENST00000527920 PATE3B3GLJ2 98 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 TM4SF5O14894 197 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 ADCY5O95622 1261 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 GSCP56915 257 aaPredicted RBP34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 ECT2LQ008S8 904 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 CENPCQ03188 943 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 SULT2A1Q06520 285 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 TRIM61Q5EBN2 209 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 CXorf57Q6NSI4 855 aaKnown RBP34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 SLC23A3Q6PIS1 610 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 NUP58Q9BVL2 599 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 PCED1AQ9H1Q7 454 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 RTN4Q9NQC3 1192 aaKnown RBP34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 VANGL2Q9ULK5 521 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 MYO6Q9UM54 1294 aa34.07■■■■□ 3.04
SSSCA1-205ENST00000527920 DCDC2BA2VCK2 349 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 CLDN11O75508 207 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 IRX4P78413 519 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 SYCP2LQ5T4T6 812 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 TRNP1Q6NT89 227 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 CIR1Q86X95 450 aaPredicted RBP34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 C1orf74Q96LT6 269 aa34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 NUSAP1Q9BXS6 441 aaKnown RBP34.06■■■■□ 3.04
SSSCA1-205ENST00000527920 CCDC172P0C7W6 258 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 RDXP35241 583 aaKnown RBP34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 VASPP50552 380 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 DUOXA1Q1HG43 343 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 APCDD1Q8J025 514 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 DEFB119Q8N690 84 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 PCDHB18PQ96TA0 734 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 RSPH9Q9H1X1 276 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 ANLNQ9NQW6 1124 aa34.05■■■■□ 3.04
SSSCA1-205ENST00000527920 I6L893 689 aaPredicted RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 ENDOD1O94919 500 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 NSFP46459 744 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 CDH4P55283 916 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 RPS14P62263 151 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 CLEC16AQ2KHT3 1053 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 WDR45BQ5MNZ6 344 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 RNF219Q5W0B1 726 aaPredicted RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 ZNF776Q68DI1 518 aaPredicted RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 PHF13Q86YI8 300 aaPredicted RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 ZNF683Q8IZ20 524 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 SLC30A5Q8TAD4 765 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 CFAP57Q96MR6 1250 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 C11orf70Q9BRQ4 267 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 SIK2Q9H0K1 926 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 METTL5Q9NRN9 209 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 TBC1D30Q9Y2I9 924 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 NCOR2Q9Y618 2525 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 SPTBN2O15020 2390 aa34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 ATXN2Q99700 1313 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-205ENST00000527920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 TARSL2A2RTX5 802 aaKnown RBP34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 PDGFRAP16234 1089 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 FERP16591 822 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 CTSOP43234 321 aaPredicted RBP34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 PTP4A2Q12974 167 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 ZNF177Q13360 481 aaPredicted RBP34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 FILIP1LQ4L180 1135 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 C14orf80Q86SX3 495 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 HAPLN3Q96S86 360 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 TMEM9BQ9NQ34 198 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 SUSD2Q9UGT4 822 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 SCML1Q9UN30 329 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 SLC6A14Q9UN76 642 aa34.03■■■■□ 3.04
SSSCA1-205ENST00000527920 LAMA1P25391 3075 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms