RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 APTXQ7Z2E3 356 aaKnown RBP16.03■□□□□ 0.16
CAPN1-213ENST00000527897 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
CAPN1-213ENST00000527897 EMC1Q8N766 993 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 IGSF8Q969P0 613 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 TTC17Q96AE7 1141 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 RPL10LQ96L21 214 aaKnown RBP16.03■□□□□ 0.16
CAPN1-213ENST00000527897 CFAP57Q96MR6 1250 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 PRSS16Q9NQE7 514 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ITM2CQ9NQX7 267 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 USP36Q9P275 1121 aaKnown RBP16.03■□□□□ 0.16
CAPN1-213ENST00000527897 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ERVW-1Q9UQF0 538 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 DAAM1Q9Y4D1 1078 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ADAMTS9Q9P2N4 1935 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-213ENST00000527897 A0A1B0GVM2 712 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 TCAF2A6NFQ2 919 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 LRRC10BA6NIK2 292 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 C4orf47A7E2U8 309 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 TEX33O43247 280 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 DNTTP04053 509 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 MAOBP27338 520 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 MZF1P28698 734 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-213ENST00000527897 SCNN1AP37088 669 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 MAPK8P45983 427 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 IRAK1P51617 712 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 ATP11AP98196 1134 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 ECT2LQ008S8 904 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF177Q13360 481 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-213ENST00000527897 CDO1Q16878 200 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 UAP1L1Q3KQV9 507 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 PLEKHG6Q3KR16 790 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 SLC25A52Q3SY17 297 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 BRMS1LQ5PSV4 323 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 SYCP2LQ5T4T6 812 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 TTC39BQ5VTQ0 682 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-213ENST00000527897 GANCQ8TET4 914 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 TMPRSS4Q9NRS4 437 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 WSB2Q9NYS7 404 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-213ENST00000527897 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 PAXBP1Q9Y5B6 917 aa16.02■□□□□ 0.16
CAPN1-213ENST00000527897 SYCE3A1L190 88 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 TTC34A8MYJ7 566 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 SIN3BO75182 1162 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 GJB6O95452 261 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 F9P00740 461 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 CYP1A1P04798 512 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-213ENST00000527897 MMP8P22894 467 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 OXTRP30559 389 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 DPP6P42658 865 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
CAPN1-213ENST00000527897 CXCR3P49682 368 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 STK19P49842 368 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-213ENST00000527897 LIMK1P53667 647 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 MTA1Q13330 715 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 DUOXA1Q1HG43 343 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 PPM1JQ5JR12 505 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 TRNP1Q6NT89 227 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 TRIM72Q6ZMU5 477 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 METTL3Q86U44 580 aaKnown RBP16.01■□□□□ 0.15
CAPN1-213ENST00000527897 FAM131BQ86XD5 332 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 SNX19Q92543 992 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 FOXJ1Q92949 421 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 MYO19Q96H55 970 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 PCDHB18PQ96TA0 734 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 GTPBP2Q9BX10 602 aaKnown RBP16.01■□□□□ 0.15
CAPN1-213ENST00000527897 MIR1-1HGQ9H1L0 117 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 TMEM9BQ9NQ34 198 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 ANLNQ9NQW6 1124 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 ADAM22Q9P0K1 906 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 SLCO3A1Q9UIG8 710 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 SPTBN2O15020 2390 aa16.01■□□□□ 0.15
CAPN1-213ENST00000527897 NUMA1Q14980 2115 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 CACNA1AO00555 2505 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 SRGAP2O75044 1071 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 ENGP17813 658 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 NNMTP40261 264 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 ATXN3P54252 364 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 RPS14P62263 151 aaKnown RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 SLC12A1Q13621 1099 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 HNRNPA1L2Q32P51 320 aaKnown RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 ZNF776Q68DI1 518 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 CXorf57Q6NSI4 855 aaKnown RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 LRRC31Q6UY01 552 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 NT5C3BQ969T7 300 aa16■□□□□ 0.15
CAPN1-213ENST00000527897 PGAP3Q96FM1 320 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 ZNF419Q96HQ0 510 aaPredicted RBP16■□□□□ 0.15
CAPN1-213ENST00000527897 MRGPRX3Q96LB0 322 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms