RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PMM2O15305 246 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 NNTQ13423 1086 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 CDH18Q13634 790 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 DCAF6Q58WW2 860 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 PPM1KQ8N3J5 372 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 OR2T34Q8NGX1 318 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 SPATA20Q8TB22 786 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 ERCC4Q92889 916 aaPredicted RBP24.41■■□□□ 1.5
CPSF1-202ENST00000527827 SERPINB11Q96P15 392 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 BBC3Q96PG8 261 aaPredicted RBP24.41■■□□□ 1.5
CPSF1-202ENST00000527827 FAM129BQ96TA1 746 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 METTL14Q9HCE5 456 aaKnown RBP24.41■■□□□ 1.5
CPSF1-202ENST00000527827 XPO7Q9UIA9 1087 aaKnown RBP24.41■■□□□ 1.5
CPSF1-202ENST00000527827 FZD4Q9ULV1 537 aa24.41■■□□□ 1.5
CPSF1-202ENST00000527827 SMG1Q96Q15 3661 aaKnown RBP24.41■■□□□ 1.5
CPSF1-202ENST00000527827 LRRC72A6NJI9 287 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 WNT9AO14904 365 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 RNASEH2AO75792 299 aaKnown RBP24.4■■□□□ 1.5
CPSF1-202ENST00000527827 LUC7L3O95232 432 aaKnown RBP24.4■■□□□ 1.5
CPSF1-202ENST00000527827 SRPRAP08240 638 aaKnown RBP24.4■■□□□ 1.5
CPSF1-202ENST00000527827 SLC8A1P32418 973 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 RPL34P49207 117 aaKnown RBP24.4■■□□□ 1.5
CPSF1-202ENST00000527827 SFSWAPQ12872 951 aaKnown RBP24.4■■□□□ 1.5
CPSF1-202ENST00000527827 SCUBE3Q8IX30 993 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 AADATQ8N5Z0 425 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 ADAM32Q8TC27 787 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 OMDQ99983 421 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 SLCO3A1Q9UIG8 710 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 ASXL3Q9C0F0 2248 aa24.4■■□□□ 1.5
CPSF1-202ENST00000527827 A0A087WV48 116 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 EDDM13A0A1B0GTR0 161 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 A0A1W2PR77 199 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 CBX4O00257 560 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 CCR5P51681 352 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 TAC4Q86UU9 113 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 TMPRSS12Q86WS5 348 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 APCDD1Q8J025 514 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 SAP25Q8TEE9 199 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 PCDHGA1Q9Y5H4 931 aa24.39■■□□□ 1.49
CPSF1-202ENST00000527827 MOCS2O96007 188 aaPredicted RBP24.38■■□□□ 1.49
CPSF1-202ENST00000527827 CD38P28907 300 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 GPD2P43304 727 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 PSMD8P48556 350 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 ECT2LQ008S8 904 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 SYPL2Q5VXT5 272 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 RRAGAQ7L523 313 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 ARHGEF19Q8IW93 802 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 CCDC117Q8IWD4 279 aaPredicted RBP24.38■■□□□ 1.49
CPSF1-202ENST00000527827 LGI2Q8N0V4 545 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 STK40Q8N2I9 435 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 PTPRN2Q92932 1015 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 SKA1Q96BD8 255 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 AASDHPPTQ9NRN7 309 aa24.38■■□□□ 1.49
CPSF1-202ENST00000527827 E9PAM4 449 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 ENC1O14682 589 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 SMC2O95347 1197 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 GOT1P17174 413 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 CLDN6P56747 220 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 RAP1GAP2Q684P5 730 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 SND1Q7KZF4 910 aaKnown RBP eCLIP24.37■■□□□ 1.49
CPSF1-202ENST00000527827 BEND5Q7L4P6 421 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 SMARCE1Q969G3 411 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 FAM149B1Q96BN6 582 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 CRELD1Q96HD1 420 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 CNDP2Q96KP4 475 aaKnown RBP24.37■■□□□ 1.49
CPSF1-202ENST00000527827 RPL10LQ96L21 214 aaKnown RBP24.37■■□□□ 1.49
CPSF1-202ENST00000527827 CEP63Q96MT8 703 aa24.37■■□□□ 1.49
CPSF1-202ENST00000527827 ARID1BQ8NFD5 2236 aaPredicted RBP24.37■■□□□ 1.49
CPSF1-202ENST00000527827 MYLKQ15746 1914 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 PLK4O00444 970 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 MOCS3O95396 460 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 ITGAVP06756 1048 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 ABCB4P21439 1286 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 TACR2P21452 398 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 ADPRHP54922 357 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 GCNT1Q02742 428 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 DNAJC3Q13217 504 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 KREMEN1Q96MU8 473 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 ST7Q9NRC1 585 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 CEP83Q9Y592 693 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 DOCK9Q9BZ29 2069 aa24.36■■□□□ 1.49
CPSF1-202ENST00000527827 P4HA2O15460 535 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 LDOC1O95751 146 aaPredicted RBP24.35■■□□□ 1.49
CPSF1-202ENST00000527827 ADH1BP00325 375 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 CD44P16070 742 aaKnown RBP24.35■■□□□ 1.49
CPSF1-202ENST00000527827 C5AR1P21730 350 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 STK19P49842 368 aaPredicted RBP24.35■■□□□ 1.49
CPSF1-202ENST00000527827 CCDC40Q4G0X9 1142 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 ZC3H12AQ5D1E8 599 aaKnown RBP24.35■■□□□ 1.49
CPSF1-202ENST00000527827 DENND1BQ6P3S1 775 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 OR14C36Q8NHC7 312 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 SERAC1Q96JX3 654 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 GTPBP4Q9BZE4 634 aaKnown RBP24.35■■□□□ 1.49
CPSF1-202ENST00000527827 GDF3Q9NR23 364 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 CNTN6Q9UQ52 1028 aa24.35■■□□□ 1.49
CPSF1-202ENST00000527827 PSMA7O14818 248 aa24.34■■□□□ 1.49
CPSF1-202ENST00000527827 SART1O43290 800 aaKnown RBP24.34■■□□□ 1.49
CPSF1-202ENST00000527827 LATO43561 262 aa24.34■■□□□ 1.49
CPSF1-202ENST00000527827 IGLV3-25P01717 112 aa24.34■■□□□ 1.49
CPSF1-202ENST00000527827 APOEP02649 317 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms