RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 FOXJ1Q92949 421 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NT5C3BQ969T7 300 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NOX5Q96PH1 765 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NUP58Q9BVL2 599 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 GTPBP2Q9BX10 602 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 RSPH9Q9H1X1 276 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 C6orf106Q9H6K1 298 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 SYNCQ9H7C4 482 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 TMPRSS4Q9NRS4 437 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 PIGVQ9NUD9 493 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 KIAA1522Q9P206 1035 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 SUN2Q9UH99 717 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NOCTQ9UK39 431 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 SIK3Q9Y2K2 1263 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 HS3ST4Q9Y661 456 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 TYW5A2RUC4 315 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 MEI4A8MW99 385 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 M0QYT0 321 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 PAGE1O75459 146 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 GJB3O75712 270 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 CNTN5O94779 1100 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 GFPT2O94808 682 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ASLP04424 464 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC2A3P11169 496 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 CD59P13987 128 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 PDGFRAP16234 1089 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ABCB4P21439 1286 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 MATKP42679 507 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 CXCR3P49682 368 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 STK19P49842 368 aaPredicted RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 PLK1P53350 603 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 JAM2P57087 298 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 SEMA3BQ13214 749 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ARID5BQ14865 1188 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 NCAPHQ15003 741 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 C5orf22Q49AR2 442 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 WDR45BQ5MNZ6 344 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 SYCP2LQ5T4T6 812 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ERICH1Q86X53 443 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF683Q8IZ20 524 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ZCCHC9Q8N567 271 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 MINDY1Q8N5J2 469 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF557Q8N988 423 aaPredicted RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 KDM1BQ8NB78 822 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 RNF34Q969K3 372 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 C18orf8Q96DM3 657 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 RPL10LQ96L21 214 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 GBP4Q96PP9 640 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 TBCBQ99426 244 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ORAI3Q9BRQ5 295 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 ARHGEF38Q9NXL2 777 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 SERGEFQ9UGK8 458 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC12A6Q9UHW9 1150 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 TMEM59LQ9UK28 342 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 OR51B4Q9Y5P0 310 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 CABIN1Q9Y6J0 2220 aa10.77□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A1B0GTW7 788 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 TOP3BO95985 862 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 SRPRAP08240 638 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 VAV1P15498 845 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF18P17022 549 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FLT3P36888 993 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 SCNN1AP37088 669 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 SULT1E1P49888 294 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 POLR2FP61218 127 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ST8SIA6P61647 398 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 NOMO3P69849 1222 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM193AP78312 1265 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ECT2LQ008S8 904 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FMO1Q01740 532 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 RAB6CQ53S08 254 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 NAA35Q5VZE5 725 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 BNIPLQ7Z465 357 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 RABEPKQ7Z6M1 372 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ZDHHC17Q8IUH5 632 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 STK40Q8N2I9 435 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FRS2Q8WU20 508 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PTPRN2Q92932 1015 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PGAP3Q96FM1 320 aaPredicted RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 RPRD1AQ96P16 312 aaPredicted RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PCDHB18PQ96TA0 734 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 RAB6CQ9H0N0 254 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 MIR1-1HGQ9H1L0 117 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 PABPC3Q9H361 631 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FBRSQ9HAH7 460 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 NLRC4Q9NPP4 1024 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM207AQ9NSI2 230 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms