RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GMIPQ9P107 970 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 USP36Q9P275 1121 aaKnown RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 TBC1D14Q9P2M4 693 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 IL17BQ9UHF5 180 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 USP9YO00507 2555 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 METTL12A8MUP2 240 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 XPO1O14980 1071 aaKnown RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TRIM66O15016 1216 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 HOXC11O43248 304 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TULP3O75386 442 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 ADCY5O95622 1261 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 PLEKP08567 350 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 UNGP13051 313 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 SLC5A3P53794 718 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 BPIFB4P59827 614 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 CDR2Q01850 454 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 GAD2Q05329 585 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 CCDC173Q0VFZ6 552 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 LY6DQ14210 128 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 STILQ15468 1287 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TBC1D25Q3MII6 688 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 C10orf76Q5T2E6 689 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 PM20D1Q6GTS8 502 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 SDE2Q6IQ49 451 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TMEM110Q86TL2 294 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 MIB1Q86YT6 1006 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 NUP93Q8N1F7 819 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 CACTIN-AS1Q8N1I8 211 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 TC2NQ8N9U0 490 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 STK32AQ8WU08 396 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 SYN2Q92777 582 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-204ENST00000526430 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 DNAJC7Q99615 494 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 MIR1-1HGQ9H1L0 117 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 GRPEL1Q9HAV7 217 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 PNPLA8Q9NP80 782 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 OSER1Q9NX31 292 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 DEC1Q9P2X7 70 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 FTSJ1Q9UET6 329 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 CREBBPQ92793 2442 aa11.38□□□□□ -0.59
NEDD8-204ENST00000526430 NBPF19A0A087WUL8 3843 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 A0A1B0GVT2 93 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 M0QYV0 167 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 GFRA2O00451 464 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 BRINP1O60477 761 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 FERP16591 822 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 KRT9P35527 623 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 RGS7P49802 495 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CCT8P50990 548 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 AFF3P51826 1226 aaKnown RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 BCAT1P54687 386 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 ADKP55263 362 aaKnown RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 NOMO3P69849 1222 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 ARID5AQ03989 594 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 BST2Q10589 180 aaKnown RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 TAF10Q12962 218 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 PTP4A2Q12974 167 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 TARDBPQ13148 414 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CCDC157Q569K6 752 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 LY6G5CQ5SRR4 150 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 DCAF12L1Q5VU92 463 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 SFMBT2Q5VUG0 894 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 EGFLAMQ63HQ2 1017 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 DENND5BQ6ZUT9 1274 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 IGSF8Q969P0 613 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 TOE1Q96GM8 510 aaKnown RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CPXM1Q96SM3 734 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 LGMNQ99538 433 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CHP1Q99653 195 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 AGPAT1Q99943 283 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 GPR174Q9BXC1 333 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 PCED1AQ9H1Q7 454 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 HAUS4Q9H6D7 363 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 NMUR1Q9HB89 426 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 OSGEPQ9NPF4 335 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 CHORDC1Q9UHD1 332 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
NEDD8-204ENST00000526430 LUC7L2Q9Y383 392 aaKnown RBP11.37□□□□□ -0.59
NEDD8-204ENST00000526430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.37□□□□□ -0.593e-9■■□□□ 11.5
NEDD8-204ENST00000526430 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 FAM170AA1A519 330 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ZNF840PA6NDX5 716 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 PIK3R2O00459 728 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■□□□ 12.1
NEDD8-204ENST00000526430 MFAP3LO75121 409 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 RFPL3O75679 317 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 IGLV3-19P01714 112 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 FYNP06241 537 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 SETSIPP0DME0 302 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
NEDD8-204ENST00000526430 CDC25BP30305 580 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms