RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DPP9Q86TI2 863 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 DIS3L2Q8IYB7 885 aaKnown RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 LNX2Q8N448 690 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 PPP1R35Q8TAP8 253 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 SNX19Q92543 992 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 TAAR1Q96RJ0 339 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 AIFM2Q9BRQ8 373 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 LRFN3Q9BTN0 628 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 TINAGL1Q9GZM7 467 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 PORCNQ9H237 461 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 FOXP1Q9H334 677 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 R3HDMLQ9H3Y0 253 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 CYP39A1Q9NYL5 469 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 AGAP1Q9UPQ3 857 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 MTMR6Q9Y217 621 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP48-211ENST00000526044 PFASO15067 1338 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 MGAMO43451 1857 aa4.96□□□□□ -1.61
USP48-211ENST00000526044 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SLC15A5A6NIM6 579 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 B4DLN1 442 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 TNPO2O14787 897 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 ADAMTS3O15072 1205 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 TUSC2O75896 110 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SOAT2O75908 522 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 KIF20AO95235 890 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 PROZP22891 400 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 HOXD10P28358 340 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 DDIT3P35638 169 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 MPLP40238 635 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 PSMC4P43686 418 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 KCNJ5P48544 419 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 HSD17B4P51659 736 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SOX8P57073 446 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 RPS6P62753 249 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 RAB1AP62820 205 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 GHRHRQ02643 423 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 TCF15Q12870 199 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 PKP1Q13835 747 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 MLC1Q15049 377 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 NONOQ15233 471 aaKnown RBP eCLIP4.96□□□□□ -1.62
USP48-211ENST00000526044 NPY5RQ15761 445 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 UBE2SQ16763 222 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ARHGEF16Q5VV41 709 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 KRBA2Q6ZNG9 492 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 Q6ZNX1 250 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 FAM43BQ6ZT52 329 aaPredicted RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 PIK3AP1Q6ZUJ8 805 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 GPR142Q7Z601 462 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ABRAQ8N0Z2 381 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 MYO1HQ8N1T3 1032 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SLC44A3Q8N4M1 653 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SLC9A6Q92581 669 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 RMDN3Q96TC7 470 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 AGAP2Q99490 1192 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 MPHOSPH6Q99547 160 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 A1CFQ9NQ94 594 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 C1orf112Q9NSG2 853 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 KCTD5Q9NXV2 234 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 SAGE1Q9NXZ1 904 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ETAA1Q9NY74 926 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ADD3Q9UEY8 706 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 NOL7Q9UMY1 257 aaKnown RBP4.96□□□□□ -1.62
USP48-211ENST00000526044 ATP6V1DQ9Y5K8 247 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 ADGRA2Q96PE1 1338 aa4.96□□□□□ -1.62
USP48-211ENST00000526044 A0A0G2JMZ2 1700 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 KIF28PB7ZC32 967 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 VPS4BO75351 444 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PGK2P07205 417 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 MYCLP12524 364 aaPredicted RBP4.95□□□□□ -1.62
USP48-211ENST00000526044 ADORA2AP29274 412 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 NPTX2P47972 431 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 AGFG1P52594 562 aaKnown RBP4.95□□□□□ -1.62
USP48-211ENST00000526044 MC2RQ01718 297 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 FOXI1Q12951 378 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 LETM2Q2VYF4 491 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ANO6Q4KMQ2 910 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ARHGAP29Q52LW3 1261 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 RILPL1Q5EBL4 403 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 FAM160B1Q5W0V3 765 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ATL3Q6DD88 541 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 OVCH2Q7RTZ1 564 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PPP1R32Q7Z5V6 425 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 NEK8Q86SG6 692 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 FAM133AQ8N9E0 248 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PCSK9Q8NBP7 692 aaKnown RBP4.95□□□□□ -1.62
USP48-211ENST00000526044 PSD4Q8NDX1 1056 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 GPR150Q8NGU9 434 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 TBCKQ8TEA7 893 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 SLC39A13Q96H72 371 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ERO1AQ96HE7 468 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 PGBD1Q96JS3 809 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 C8orf48Q96LL4 319 aa4.95□□□□□ -1.62
USP48-211ENST00000526044 ZNF396Q96N95 335 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms